Pairwise Alignments

Query, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 85.9 bits (211), Expect = 3e-22
 Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 3/147 (2%)

Query: 8   LVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRRQLVR 67
           L+++L   +  RQ AED++ D ++R+L R   +    PRAFL   A  L+ D  RR  + 
Sbjct: 23  LLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAAVAKGLMFDHFRRAALE 82

Query: 68  QAEPLD-ALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIEGLSHQQ 126
           QA   + AL  ++   S E+QH +  D  L  + + L +LS   R +FL  +++G+ H +
Sbjct: 83  QAYLAELALIPEAEQPSPEMQHLILED--LKAIDRLLGKLSSKARAAFLHSRLDGMGHAE 140

Query: 127 IAERLGISRSLVEKHIVNAMKHCRVRM 153
           IAERLG+S S V ++I   M+ C V +
Sbjct: 141 IAERLGVSVSRVRQYIAQGMRQCYVAL 167