Pairwise Alignments

Query, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

Subject, 173 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 88.2 bits (217), Expect = 6e-23
 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 7/147 (4%)

Query: 8   LVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRRQLVR 67
           L ++L ++LG+   A D+A D ++R+L+R    Q+  PRAFL   A  LV+D  RR+ + 
Sbjct: 24  LHTWLRSKLGNAADAADLAQDTFVRLLQRREQLQLNAPRAFLRTVARGLVIDHWRREELH 83

Query: 68  QAEPLDALD--ADSRLHSSELQHDL-QLDQRLALMQKALDELSRPCRDSFLLRKIEGLSH 124
           +A  L+AL    ++ + S E +  L +L +R+A M   LD L    R +FLL + EGL H
Sbjct: 84  RAY-LEALAHVPEALVPSVETRELLLELLERIARM---LDGLKPKVRRAFLLAQCEGLKH 139

Query: 125 QQIAERLGISRSLVEKHIVNAMKHCRV 151
           Q IAE++GIS   VE++I NA+ HC V
Sbjct: 140 QAIAEQMGISVRTVERYIANALYHCYV 166