Pairwise Alignments

Query, 590 a.a., succinate dehydrogenase flavoprotein subunit from Pseudomonas putida KT2440

Subject, 602 a.a., Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1) from Variovorax sp. SCN45

 Score =  666 bits (1719), Expect = 0.0
 Identities = 320/592 (54%), Positives = 430/592 (72%), Gaps = 12/592 (2%)

Query: 9   FDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASADPNDDWR 68
           FD +I+G GG+GMRA+LQLA+ G   AV++KVFPTRSHTV+AQGG+  ++ +    D+W 
Sbjct: 13  FDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGVGASLGNMS-EDNWH 71

Query: 69  WHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRPFGGQSKDF 128
           +H YDT+KGSD++GDQDAIE+MC+E P  V+EL+H G+PF R   G IYQRPFGG + ++
Sbjct: 72  YHFYDTIKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIYQRPFGGHTANY 131

Query: 129 GKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAFVGVIAICI 188
           G+     R CAA+DRTGHA+LHTLYQ N++A T F  E+ A+DL+++++G  VGV A+ +
Sbjct: 132 GEK-PVQRACAAADRTGHAMLHTLYQKNVEARTQFFVEWMALDLIRDEEGDVVGVTALEM 190

Query: 189 ETGETLYIKSKATVLATGGAGRIYASTTNALINTGDGIGMALRAGVPVQDIEMWQFHPTG 248
           ETG+   +++K  +LATGGAGRI+ ++TNA INTGDG+GMA R+G+P+QD+E WQFHPTG
Sbjct: 191 ETGDLHILQAKTVLLATGGAGRIFQASTNAFINTGDGLGMAARSGIPLQDMEFWQFHPTG 250

Query: 249 IAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEIIAGNGVGP 308
           +AGAGVL+TEGCRGEG  L+N++GERFMERYAP  KDLA RD V+RSM +EI  G G GP
Sbjct: 251 VAGAGVLLTEGCRGEGAILLNSNGERFMERYAPTLKDLAPRDFVSRSMDQEIKEGRGCGP 310

Query: 309 NKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMGGVATNIHG 368
           NKD+VLLKLDHLG + +H RLP + E+   FA+VD    P+PVVPT HY MGG+ TNIHG
Sbjct: 311 NKDYVLLKLDHLGADTIHKRLPSVYEIGVNFANVDITKEPIPVVPTIHYQMGGIPTNIHG 370

Query: 369 QAITMDADGQDHIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLHLEKALSEG 428
           Q +    +    ++ GL+AVGE +CVSVHGANRLG NSLLDL+VFGRAAG H+ +   + 
Sbjct: 371 QVVVQKGEDNSAVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAGNHIVEFADKL 430

Query: 429 VEYRDASDTDVDVALNRLNKLNERTSGEDVASLKRELQSCMQNYFGVFRTGEYMQKGIEQ 488
            E++   +   D  L RLN+L   T GE    +  E+++ MQ +  VFR    M +G+ +
Sbjct: 431 KEHKPLPNDAADRTLERLNRLEATTGGEYAQDVAGEIRAVMQQHAAVFRKQASMDEGVVK 490

Query: 489 LAGLRDRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEARKESRGAHAREDFE 548
           +A +R+R+  + + DKS+ FNTARIEALE+ NL+EVA+AT ++A ARKE RGAH  ED+E
Sbjct: 491 IAAVRERVKAIGLKDKSKVFNTARIEALEVDNLIEVAQATMVSAAARKECRGAHTVEDYE 550

Query: 549 ----------DRDDENWLCHTLYYPGEKRVAKRGVNFAPKTVPAFEPKVRTY 590
                      RDD NW+ HTL+Y  + R++ + V   P TV +  PKVRT+
Sbjct: 551 RPADDPVAPLGRDDANWMKHTLWYSDDNRLSYKPVKLQPLTVASVPPKVRTF 602