Pairwise Alignments

Query, 294 a.a., succinyl-CoA synthetase alpha subunit from Pseudomonas putida KT2440

Subject, 297 a.a., Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) from Variovorax sp. SCN45

 Score =  309 bits (792), Expect = 4e-89
 Identities = 158/293 (53%), Positives = 197/293 (67%), Gaps = 9/293 (3%)

Query: 1   MSVLINKDTKVICQGFTGSQGTFHSEQAIAYGT---KMVGGVTPGKGGTTHLGLPVFNTV 57
           MS+ INKDTKVI QG TG  G FH+E+   Y       V GV P K G +   +P+F +V
Sbjct: 1   MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNAFVAGVNPKKAGESIFNIPIFGSV 60

Query: 58  KEAVEATGADASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDA--KVKCDEL 115
           KEA   TGA  SVIYVP      +I EA    + L +CITEGIP  DML+   K+K  E 
Sbjct: 61  KEAASQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMKAKEA 120

Query: 116 G----VTLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFG 171
                  L+GPNCPG+ITP E KIGIMPGHIH  G++G+VSRSGTLTYEAV Q T+ G G
Sbjct: 121 AGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTEIGLG 180

Query: 172 QSTCVGIGGDPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHVTKPVV 231
           QS+ VGIGGDPI G   ID++K F +DP T+A++MIGEIGG  E +AA + K ++ KPVV
Sbjct: 181 QSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEADAARWCKENMKKPVV 240

Query: 232 SYIAGVTAPAGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKAL 284
            +IAGVTAP GKRMGHAGA+ISGG  TAD K + +++ G    R+ +++ K L
Sbjct: 241 GFIAGVTAPPGKRMGHAGALISGGADTADAKLSIMEECGFTVTRNFSELAKLL 293