Pairwise Alignments

Query, 643 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 995 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  262 bits (669), Expect = 6e-74
 Identities = 174/489 (35%), Positives = 266/489 (54%), Gaps = 21/489 (4%)

Query: 164 QEIVIKAGILALFALLFTFLLARRLALSLAKPISDMGHAVKAIQQGEYNTPLPV-VDDSE 222
           QE++ K     +  +    L+  +  LS  +P  D  +A+   +  +Y     V V D E
Sbjct: 370 QEVIGKTREYLISEIAPESLVDHQGDLSARRPFRDFDYAIDTGRGKKYLRISGVPVFDKE 429

Query: 223 LGHLA-RHINNLASALEQASDEQKQAIAELIQAREEAEQANRAKSDFLAMMSHELRTPMN 281
            G +  R   +  +A+       K+  A+L +++  AE AN+AKS FLA MSHE+RTPMN
Sbjct: 430 CGFIGYRGTGSDVTAI-------KEIEAQLRESKSVAEAANKAKSLFLANMSHEIRTPMN 482

Query: 282 GVLGMLQLLETTPLSSEQADYTAVASESTGHLLKVINDILDFSRIERAALQLEHIDFNLG 341
           G++GM  L     L ++Q  +     +S   LL +INDILD S+ E   + ++   F+L 
Sbjct: 483 GIIGMAHLALGGELPAKQRHHIQSIKQSAQRLLGIINDILDLSKAEAGKVVIDAAPFDLA 542

Query: 342 ELITNSVQSFQHSAQQRGLGLHLQLPAGIEQLQVNGDPTRIRQILLNLIGNALKFTERGQ 401
            LI  ++      A ++ L +++++ + + +  V GDP RIRQILLN + NA+KFT  G 
Sbjct: 543 NLIDEAISVVAAQASEKRLPINVRIASEVPR-GVIGDPLRIRQILLNYLSNAVKFTSSGG 601

Query: 402 VQVDARWQV-LDRQLIWLTCSVRDTGIGIDSDRLEMMFVAFQQADSSISRRYGGTGLGLS 460
           + VD + +         L  +V DTG G+  ++   +F +FQQA++S S ++GGTGLGL+
Sbjct: 602 IDVDVQIEGGKTAPPTKLRFAVSDTGCGLTPEQQATLFQSFQQAEASTSAKFGGTGLGLA 661

Query: 461 IARTLAERMGGKLRGESREGLGSTF--TLEMPLALAN-PAPVPLTPPTTVRTTVPDND-- 515
           IAR LAE MGG+   ES+ G GSTF  T++   A+     P     P  +       D  
Sbjct: 662 IARQLAELMGGQAGVESQYGSGSTFWFTVQFQGAVDGVDCPSKFLSPIKIHNNFAHQDHS 721

Query: 516 -----QVLLVEDNPVNRSVVEAMLRSLGLAVCTAEDGLEAVELVGRQRFAAVLMDCRLPH 570
                QVLL ED+  N+ V   +L + G+ V    +G  AVE     ++  VLMD R+P 
Sbjct: 722 ILQGAQVLLAEDDLTNQMVAVGLLEAAGMLVDVVGNGAAAVEKAASGKYEIVLMDVRMPG 781

Query: 571 LDGYEATRRIRQLPNGAGLPIIALTANALQGDRERCMAAGMDDYLSKPLRRTELQQVLQR 630
           +DG  ATR IR+      LPI+A+TANA+   ++ C+AAGM D++SKP +  +L  V+Q 
Sbjct: 782 MDGITATRLIRENVELLDLPIVAMTANAMNEHKDECLAAGMSDFVSKPFQPEQLYGVIQN 841

Query: 631 WLPGQTTAT 639
           W+ G   A+
Sbjct: 842 WVTGLAEAS 850