Pairwise Alignments

Query, 643 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 921 a.a., two-component sensor histidine kinase BarA from Dickeya dianthicola ME23

 Score =  250 bits (639), Expect = 2e-70
 Identities = 201/653 (30%), Positives = 312/653 (47%), Gaps = 42/653 (6%)

Query: 7   WDIHTRTQIISLGPALLLTLLLISFFTFVRIQDLRQELNHTGQLIANQLAPASEYGVISG 66
           + +  R  I+ L PA+L+ LLL SFF   R   L+++L   G  I   LA  S Y +   
Sbjct: 4   YSLRARMMILILAPAMLIGLLLSSFFVIHRYNQLQEQLADAGASIIQPLAVNSAYALTQR 63

Query: 67  NNEVLEGLMRATLSIPH---VRFLEVQDSRNHILVYVEQSDESANRAQQVEVFQAPIRLQ 123
             E L  L+   L   H   VR + V D+RN ++V    ++      Q       P  L+
Sbjct: 64  QPESLRQLVNM-LHRHHSGIVRTISVFDARNQLIVTSNPNNPHGQLLQVPSGNPLPTALR 122

Query: 124 Q------IRLDNDFLQQGKATSPAIGDDY--LGRVIVGMSDDAFSQRQQEIVIKAGILAL 175
                  + L      +G  ++  +      +G V V +  +    +Q   +  A +L L
Sbjct: 123 MQNEGECLVLQMPIENEGDVSASTLISRQAPMGYVAVELDLNTIRLQQYREMFMAAMLLL 182

Query: 176 FALLFTFLLARRLALSLAKPISDMGHAVKAIQQGEYNTPLPVVDDSELGHLARHINNLAS 235
           F +    LLA RL   +  PI +M   V  I++G+ ++ +      EL  L   IN++A 
Sbjct: 183 FCMGVAMLLAYRLMRDVTIPIRNMVETVDRIRRGQLDSRVEGHMLGELDMLKNGINSMAM 242

Query: 236 ALEQASDEQKQAI------------------AELIQAREEAEQANRAKSDFLAMMSHELR 277
           +L    +E +Q I                   EL  A++ A++A R KS+FLA MSHELR
Sbjct: 243 SLTAYHEEMQQNIDQATYDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELR 302

Query: 278 TPMNGVLGMLQLLETTPLSSEQADYTAVASESTGHLLKVINDILDFSRIERAALQLEHID 337
           TP+NGV+G  +    T L+S Q DY      S  +LL +IND+LDFS++E   L LE+I 
Sbjct: 303 TPLNGVIGFTRQTLKTQLTSTQKDYLQTIERSANNLLNIINDVLDFSKLEAGKLVLENIP 362

Query: 338 FNLGELITNSVQSFQHSAQQRGLGLHLQLPAGIEQLQVNGDPTRIRQILLNLIGNALKFT 397
           F+L   +   +    H+A ++GL L L +   + + Q  GDP R++QI+ NL+GNA+KFT
Sbjct: 363 FSLHNTLDEVIMLLAHTAHEKGLELTLNIQHDVPE-QFVGDPLRLQQIITNLLGNAIKFT 421

Query: 398 ERGQVQVDARWQVLDRQLIWLTCSVRDTGIGIDSDRLEMMFVAFQQADSSISRRYGGTGL 457
           E+G + +    +  +   + L   ++DTGIGI   +   +F AF+QAD+SISR++GGTGL
Sbjct: 422 EQGNIDIRIEKRRQESVQVLLEIQIKDTGIGIAEAQQTQLFQAFRQADTSISRQHGGTGL 481

Query: 458 GLSIARTLAERMGGKLRGESREGLGSTFTLEMPLALANPAPVPLTPPTTVRTTVPDNDQV 517
           GL I + L   MGG +   S+   G+TF   + L L    P  L P             +
Sbjct: 482 GLVITQRLVREMGGDISFHSKLNQGTTFWCTVNLQL---NPHVLEPDYHFARL--QGKHL 536

Query: 518 LLVEDNPVNRSVVEAMLRSLGLAVCTAEDGLEAVELVGRQRFAAVLMDCRLPHLDG-YEA 576
             VE NP        +L    L V  +      +E +  + F  +L+   + + +   + 
Sbjct: 537 AYVEANPAAAQATLDILVHTPLTVSYS----PTLEQLPERTFDILLIGIPIHYRNTLLDF 592

Query: 577 TRRIRQLPNGAGLPIIALTANALQGDRERCMAAGMDDYLSKPLRRTELQQVLQ 629
           T  IR     A   I+AL + A + + E+  + G+   LSKP+    L  +LQ
Sbjct: 593 TPLIRDFCRLASCVILALPSMA-EMEAEQLKSFGIHASLSKPITAPRLLTMLQ 644



 Score = 94.0 bits (232), Expect = 3e-23
 Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 2/130 (1%)

Query: 501 LTPPTTVRTTVPDNDQVLLVEDNPVNRSVVEAMLRSLGLAVCTAEDGLEAVELVGRQRFA 560
           L PP    + +P +  V+ V+DNP N  ++ A+L      +   E G +A+         
Sbjct: 658 LPPPAVSLSLLPLS--VMAVDDNPANLKLIGALLEEQVENIILCESGADAIARAQGTHLD 715

Query: 561 AVLMDCRLPHLDGYEATRRIRQLPNGAGLPIIALTANALQGDRERCMAAGMDDYLSKPLR 620
            +LMD ++P +DG +A+  IRQLP  A  PI+A+TA+ + G+RE  + +GMDDYLSKP+ 
Sbjct: 716 IILMDIQMPGMDGLQASEHIRQLPQHAHTPIVAVTAHTMSGEREALLQSGMDDYLSKPID 775

Query: 621 RTELQQVLQR 630
              L+Q L R
Sbjct: 776 EQMLRQTLLR 785