Pairwise Alignments

Query, 643 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1329 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  226 bits (576), Expect = 5e-63
 Identities = 141/385 (36%), Positives = 227/385 (58%), Gaps = 18/385 (4%)

Query: 250  ELIQAREEAEQANRAKSDFLAMMSHELRTPMNGVLGMLQLLETTPLSSEQADYTAVASES 309
            EL +A+  AEQA++AKS+FLA MSHE+RTP+NGV+G   L+  T LS  QA Y ++ ++S
Sbjct: 677  ELKKAKILAEQASKAKSEFLANMSHEIRTPLNGVIGFTDLVLKTDLSETQAQYLSIVNQS 736

Query: 310  TGHLLKVINDILDFSRIERAALQLEHIDFNLGELITNSVQSFQHSAQQRGLGLHLQLPAG 369
               LL +INDILDFS+IE   L+L+    +L EL   +     +   ++GL + L +   
Sbjct: 737  GNALLNIINDILDFSKIEAGKLELDIDRCDLYELTEQTSDIITYEVHKKGLEMLLNIHPD 796

Query: 370  IEQLQVNGDPTRIRQILLNLIGNALKFTERGQVQVD---ARWQVLDRQLIWLTCSVRDTG 426
            I +  +  D  R++QI++NL+GNA KFTE G++++           R+++ +  SVRDTG
Sbjct: 797  IPRF-IWVDSVRVKQIMVNLLGNASKFTEEGEIELQLYPIDKDEASREMV-IRFSVRDTG 854

Query: 427  IGIDSDRLEMMFVAFQQADSSISRRYGGTGLGLSIARTLAERMGGKLRGESREGLGSTFT 486
            IGI +++   +F AF Q D S +++YGGTGLGL+I+  L + M   L+  S  G GSTF 
Sbjct: 855  IGIKAEKQTKIFEAFSQEDVSTTKKYGGTGLGLTISNRLLQLMHSGLQLHSTVGKGSTFY 914

Query: 487  LEMPLALANPAPVPLTPPTTVRTTVPDNDQVLLVEDNPVNRSVVEAMLRSLGLAVCTAED 546
             ++ +       + L    +V       + VL+V+DN  NR ++E M+   G++   A++
Sbjct: 915  FDLNVKYEYGERITLEEDLSV-------ENVLIVDDNDNNRMIIERMMALRGISTSQAKN 967

Query: 547  GLEAVE-LVGRQRFAAVLMDCRLPHLDGYEATRRIRQLPNGAGLPIIALTANALQGDR-- 603
            G EA++  V  ++F  VLMD  +P+++G E  R+IR++ +    PII L +++   D+  
Sbjct: 968  GFEAIQKFVEGEKFDVVLMDYHMPYMNGIETIRKIREIVDRQ--PIIFLHSSS-DDDKIL 1024

Query: 604  ERCMAAGMDDYLSKPLRRTELQQVL 628
            + C   G+   L KP++  E+   L
Sbjct: 1025 KACKELGVRKKLVKPIKLQEMYDAL 1049



 Score = 95.9 bits (237), Expect = 1e-23
 Identities = 44/122 (36%), Positives = 84/122 (68%), Gaps = 2/122 (1%)

Query: 512  PDNDQVLLVEDNPVNRSVVEAMLRSLG--LAVCTAEDGLEAVELVGRQRFAAVLMDCRLP 569
            P++ +VL+VEDN +N  + + ++ +L    A+  A +G EA+E++  +  + + MD ++P
Sbjct: 1074 PNDGKVLIVEDNTINMLLAKTVIHNLSPATAILEAANGKEALEVMKDELPSVIFMDVQMP 1133

Query: 570  HLDGYEATRRIRQLPNGAGLPIIALTANALQGDRERCMAAGMDDYLSKPLRRTELQQVLQ 629
             ++GYEAT+ IR+  N   + IIALTA  ++G+RE+CM AGM+D+++KP    ++ ++++
Sbjct: 1134 EMNGYEATQAIRKKYNKHNILIIALTAGNIKGEREKCMQAGMNDFIAKPFVEEDVIKLME 1193

Query: 630  RW 631
            +W
Sbjct: 1194 KW 1195