Pairwise Alignments

Query, 643 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 956 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  236 bits (602), Expect = 4e-66
 Identities = 146/390 (37%), Positives = 219/390 (56%), Gaps = 15/390 (3%)

Query: 243 EQKQAIAELIQAREEAEQANRAKSDFLAMMSHELRTPMNGVLGMLQLLETTPLSSEQADY 302
           EQK     L +A+E AE ANRAKS+FLA MSHE+RTPMNG+LGM+ LLE T +  EQ   
Sbjct: 554 EQKLWEKGLKEAKEVAEGANRAKSEFLASMSHEIRTPMNGLLGMIGLLEHTKMDDEQQSI 613

Query: 303 TAVASESTGHLLKVINDILDFSRIERAALQLEHIDFNLGELITNSVQSFQHSAQQRGLGL 362
             V  +S   LL +I DILD+S+IE   L+LE       E +   +  F      + L L
Sbjct: 614 VKVIKDSGESLLVIIKDILDYSKIEEGKLELELSSSKFREELNKVINIFSGMVVGKELSL 673

Query: 363 HLQLPAGIEQLQVNGDPTRIRQILLNLIGNALKFTERG---QVQVDARWQVLDRQLIWLT 419
           +L +   I Q  +  D  ++ QIL N+IGNA+KFT +G    ++V     +LD+  + L 
Sbjct: 674 NLDIAPTIPQWLIL-DNEKLSQILFNIIGNAVKFTPKGGDVSIKVSGE-PILDKNFM-LY 730

Query: 420 CSVRDTGIGIDSDRLEMMFVAFQQADSSISRRYGGTGLGLSIARTLAERMGGKLRGESRE 479
            +V+DTG+GI   +++ +   F Q     +    G+GLGL+IA  L E MGG L+ ES  
Sbjct: 731 FNVKDTGVGIPKSKIDQLINPFTQTGRGTAEEKSGSGLGLAIANKLIELMGGSLQIESEV 790

Query: 480 GLGSTFTLEMPLALANPAP-------VPLTPPTTVRTTVPDN--DQVLLVEDNPVNRSVV 530
           G GS F+  +   +++                    + + D    ++LL EDN +N   +
Sbjct: 791 GKGSEFSFTVFARISDSEEKVGKDDYEKYAKEEYKLSHISDKFPKEILLAEDNDINLKFM 850

Query: 531 EAMLRSLGLAVCTAEDGLEAVELVGRQRFAAVLMDCRLPHLDGYEATRRIRQLPNGAGLP 590
           + +++ LG +V T   G EAV+ V ++R+  + MD ++P +DG EA+R I+++  G  + 
Sbjct: 851 KLLMKQLGYSVDTVSTGEEAVKAVQKKRYDMIFMDYQMPVMDGLEASREIKKMKEGKYIR 910

Query: 591 IIALTANALQGDRERCMAAGMDDYLSKPLR 620
           II L+AN  + D ER   AGMDDYL+KP++
Sbjct: 911 IIGLSANVFKEDIERAYEAGMDDYLTKPIK 940