Pairwise Alignments

Query, 350 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 380 a.a., Putative transport protein YdiK from Xanthobacter sp. DMC5

 Score =  167 bits (422), Expect = 5e-46
 Identities = 103/330 (31%), Positives = 172/330 (52%), Gaps = 8/330 (2%)

Query: 13  LVALLGAGLWVMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAAGLLTMAWILIVA 72
           L  L G    ++ PF++++LWG I+A AS PL   L   L GR   AA L  +  + ++ 
Sbjct: 34  LALLFGWCFTIVQPFLTSILWGLIIAIASHPLFIRLCAALNGRTATAATLFVVLALTLLV 93

Query: 73  LPLVWLGFNLADHIRDATAFVRDVQVDGLPDAPAWLGGIPFVGERLVNGWQSLDQKGAAL 132
           LP + L   L + ++     + D  +  LP  PA + G   VGE L + W          
Sbjct: 94  LPAMLLADTLVNSLKLLAHHMADGTLR-LPPPPAAVRGWFLVGEPLYSFWMLASTNLDQA 152

Query: 133 LTSIKPYFGQVGNWLLARSAQIGSGVLELTLSLVFVFFFYRD---GPRLAAFVLRLLHRL 189
           ++S+       G W+L  +  +  G+LE  +++        +   G R+A  V+    RL
Sbjct: 153 ISSVASELTWAGKWMLGSATGVLLGILEFVVAIFVAAVLMANATSGQRIAGDVVT---RL 209

Query: 190 VGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVLGLVTFMLSLIP 249
            G     Y DL   T++ V  G+IG A  Q+LLA +GFL A +P A +L L+  +++++ 
Sbjct: 210 AGSGGLGYADLAVRTIRSVSKGIIGVALIQSLLAGLGFLAADIPAAGLLALLCLIIAIVQ 269

Query: 250 MGPPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLISRGGNLPLVIVLLG 309
           +   +  +P   +     +   AV   VW   V S +++VL+P ++ RG ++P+++V +G
Sbjct: 270 LPLAIVLVPVAIYAFTLLDPMPAVIFAVWCAGV-SLIEHVLRPIMLGRGVDVPMLVVFIG 328

Query: 310 VFGGLLAFGFIGLFIGPTLLAVGYSLLLDW 339
             GGLL+ G +GLF+GP +LA+GY+L+L W
Sbjct: 329 AIGGLLSSGVLGLFVGPVVLALGYTLILHW 358