Pairwise Alignments

Query, 350 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 372 a.a., Uncharacterized UPF0118 membrane protein from Variovorax sp. SCN45

 Score =  143 bits (360), Expect = 8e-39
 Identities = 107/345 (31%), Positives = 161/345 (46%), Gaps = 31/345 (8%)

Query: 12  LLVALLGAGLWVMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAAGLLTMAWILIV 71
           LL A+  A +WV+ PF  A+LWG  LA    PL R+L R + G+   AA L     + IV
Sbjct: 14  LLAAVTAAFIWVLLPFFGAVLWGVALAILFTPLFRWLLRKMPGKLNAAALLTLAICLFIV 73

Query: 72  ALPLVWLGFNLADHIRDATAFVRDVQVDG-------LPDAPAWLGGIPFVGERLVNGWQS 124
            LPL  +G +L   +   T  +R  Q++        L  +P WL         LV  +  
Sbjct: 74  ILPLAMVGVSLVQEVALVTQNIRSGQINFAAYFQQILDASPQWL-------LNLVERFNL 126

Query: 125 LDQKGAALLTSIKPYFGQVGNWLLARSAQIGSGVLELTLS----LVFVFFFYRDGPRLAA 180
            D   AA    I    GQ    + +++  IG    +  +S    L  ++F  RDG  L+ 
Sbjct: 127 GDM--AAWQARISAAAGQASQIIASQALAIGQNTFDFVVSFFVMLYLLYFLLRDGAALSK 184

Query: 181 FVLRLLHRLVGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVLGL 240
             +R    L      Y L+     ++  V G +  A AQ  L  + F   GV GA++  +
Sbjct: 185 -RMRDAVPLAKPHTHYLLNKFTTVIRATVKGNVAVAIAQGTLGGLAFWFLGVQGALLWAV 243

Query: 241 VTFMLSLIP-MGPPLAWIPATAWLVWKGEY---GMAVFLGVWGTFVISGVDNVLKPYLIS 296
           +   LSL+P +G  L W P   + +  G +   G+ +F+GV   FVI  VDN+L+P L+ 
Sbjct: 244 LMAFLSLLPAVGAALIWGPVAIYFLATGHFWQGGVLIFVGV---FVIGLVDNILRPLLVG 300

Query: 297 RGGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAV---GYSLLLD 338
           +   +P  IVL+   GG+  FG  G  IGP + A+    +SL +D
Sbjct: 301 KDTQMPDYIVLMSTIGGMAIFGINGFVIGPVIAALFMAAWSLFVD 345