Pairwise Alignments

Query, 884 a.a., sensor protein from Pseudomonas putida KT2440

Subject, 900 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  621 bits (1602), Expect = 0.0
 Identities = 357/876 (40%), Positives = 516/876 (58%), Gaps = 10/876 (1%)

Query: 8   DALLANLPRTGRGRLKVFLGAAPGVGKTFAMLQAAHAQQRQGVQVLAGVVETHGRAETEA 67
           DALL N  R  RGRLK+FLGAAPGVGKT+ ML +  A+   GV  + GVVETHGR ETEA
Sbjct: 15  DALLENAQREARGRLKIFLGAAPGVGKTYEMLMSGRAKLADGVDTVIGVVETHGRRETEA 74

Query: 68  LLGGLHQQPLLRSQYRGVTLEEMDLDGLLRAAPALALVDELAHTNAPGSRHAKRWQDVQE 127
           L+ GL   P  R  YRG  LEEMD+D +L   PAL LVDELAHTNA GSRH KR+ DVQE
Sbjct: 75  LVEGLSVVPRKRIDYRGQVLEEMDIDAILARRPALVLVDELAHTNAAGSRHPKRYMDVQE 134

Query: 128 LLAAGIDVYTTVNVQHLESLNDKVRDITGVQVRETLPDWVLQEAFELVLIDLPPRELLER 187
           +LA GI+VYTT+N+QH+ESLND V  IT ++VRET+PD ++  A ++ +ID+ P +L++R
Sbjct: 135 ILAQGINVYTTLNIQHVESLNDVVAQITRIRVRETVPDSIIDRADDVEIIDITPDDLIKR 194

Query: 188 LREGKVYVPEQARAAIDAYFSQTNLTALRELAMQTAAAQVDADLAHGYRQRGQEAPALRG 247
           L++GKVY+P  AR AI+ YFS+ NLTALRELA++  A +VD  L +  +      P   G
Sbjct: 195 LQDGKVYLPRTARRAIENYFSRGNLTALRELALRRTAQRVDEQLLNHMQSHAISGPWAAG 254

Query: 248 -RLLVGIDGDDQAERLVRHASRVAQRRHLPWSLVHVDNGRLR--DETARHRLQAAQQLAE 304
            R+LV +D       LVR+A R A R   PW+ +H+D  R +   E  + RL    +LA+
Sbjct: 255 DRVLVCLDHGRNGPGLVRYARRQADRLRAPWTALHLDTPRSQQLSEAEKDRLAGTMRLAQ 314

Query: 305 RLGGEVVLLRAGEVARTLIQHAVERRASLVLVGQSRNRLRRRLFGAGVAARLLRESRGLE 364
           +LGGE V L A ++ R +I +A     + +++G+ R    +R+F   +   L+  +  + 
Sbjct: 315 QLGGETVTLPALDLTREIIAYANANNFTHIIIGRPRKSWWQRIFQRSLTHDLIDHAGDIS 374

Query: 365 INVLDRDVQPPAPRSAV-----RRVWVWRHYLLALLATVMAAGLAWAVSSVLALPNISLV 419
           ++V+  D     P  AV     R    +R YL + L   +A  +   +   L + N++LV
Sbjct: 375 VHVISGDKNEEKPGQAVKLAPARSPQSFRSYLNSTLFVGLAIIVGIVLDQTLDVQNLALV 434

Query: 420 FLAAVLLVAVRSSLGPALACAALSFLVYDFLFIPPNFSFTIQREEDVLTLVFFLLMAALT 479
           FL AVL  AVR  LGPAL  + L  L ++F F+ P ++ T+   + ++ L+F+  +A + 
Sbjct: 435 FLMAVLAAAVRGGLGPALYASLLGALAFNFFFLEPRYTLTVSSPDSLVALLFYFGVALVA 494

Query: 480 GNLAARQRRQLQALRETQAQTSQLLDLSRRLT-VATDRQAIFKAAGQHLDGWQDAQVCLL 538
            NL    +RQ  + R     T  L   S++L    T    ++ AA Q     +   V L+
Sbjct: 495 SNLTVAVQRQAASARSRARTTEDLYLFSKKLAGTGTLDDVLWAAAYQMASMLKVRVVLLM 554

Query: 539 ERNAEGQLQVASGEACTFSDTERAAADWAWQHGQAAGHGSDTLPNGRWWWWPLAVDDQPL 598
             N    ++       T  D + AAA WAW+H +AAG G+DTLP  +  + PL      +
Sbjct: 555 PENGAIAVKAGYPPDDTLVDADIAAAQWAWEHNKAAGRGADTLPGAKRLYLPLRTGSGAV 614

Query: 599 ALLGV-RPRNGQPLSDPRRRLLTALGQPLAQALARARLAEQLEAARLHGETEQLRSALLA 657
            ++G+   R+G  L+  ++RL  AL    A A+ R +LA  ++ ARL  ET++LR+ALL 
Sbjct: 615 GVVGLDDDRSGPLLTPEQQRLFDALADQAALAVERIQLASDVDRARLAAETDRLRTALLT 674

Query: 658 SVSHDLRTPLTAMRGSIDSLLALGDAIPAEDRRELLEGTRNEAERLDRYIQNLLDMTRLG 717
           S+SHDL+TPL A+ GS  +L    D IP + R ELL     E+ERL+R+I NLLDMTR+G
Sbjct: 675 SISHDLKTPLAAILGSAGTLKDFADDIPPDARAELLSTIVEESERLNRFISNLLDMTRIG 734

Query: 718 HGGLKLARDWVAPADIVGSALNRLRVVLAPLRVHTDVPTELPLLFVHAALIEQALVNVLE 777
            G ++         D+VG+AL+R   ++    V  D+P++LP+L V   L EQ L N+++
Sbjct: 735 SGAMEPNYGLHFLGDMVGTALSRAAKIVVRHEVVLDIPSDLPMLKVDPVLFEQVLFNLID 794

Query: 778 NAARFSPANGRLELQVAVHDDQLRLTVSDQGPGIPEADREKIFDMFYTAARGDRGGQGTG 837
           NAA+++P +  + ++       + L+V+D+GPGIP  D E++FD FY   + D    GTG
Sbjct: 795 NAAKYAPEHTTIAIRGWRQGKNIFLSVADEGPGIPPDDLERVFDSFYRVRKVDHVQAGTG 854

Query: 838 LGLAICQGMIGAHGGQILVGEGIDGQGTSITLCLPL 873
           LGL+IC+G I A GG I      D  G   T+ LP+
Sbjct: 855 LGLSICKGFIEAMGGSIRAENRADRGGAQFTIGLPV 890