Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 322 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 81/268 (30%), Positives = 125/268 (46%), Gaps = 23/268 (8%)

Query: 4   TSDSLAIFLAVLDAGSFSAAARKLGRVPSAVSMAIAQLEAELDLPLFDR-ATRKALPTNA 62
           T D L +FL V + GSFSAAAR L R  S VS  IA LEA+L++ LF+R   R+   T+ 
Sbjct: 6   TLDQLQVFLTVAETGSFSAAARALNRAQSVVSYTIANLEAQLEVVLFERNGVRQPKLTDE 65

Query: 63  ALALEPQARQVICQLNLLDAQALQLHKGLEKRLTIAMAPELQTGRWSQPLEILAQAFPSL 122
             A+   AR+++  L  + A+A  L +GLE  L++A++  +        L    + FP  
Sbjct: 66  GRAMLEDARRIVAGLQEMRARAKGLKQGLEAELSVAISTMVPAEAVVAVLRDFREQFP-- 123

Query: 123 EVEVRSATQTEAIRLLHDGSVQLALVFERPGI---------DERESFLEAGSQLLVAVAS 173
                  T T ++ +   G V   ++  + GI         D+     + G   ++ V +
Sbjct: 124 -------TVTLSLNVGELGMVMDMVLSRKAGIGIGGAVLRQDDDLVMEKVGHSFMLPVVA 176

Query: 174 PRHPAGQNSGSPLPEEAFAEQRQIIV--ASGKATGSDPRMVLSRRIWLTDSYLATLDLVQ 231
             HP  Q    PL      E+ Q++V  ASG   G D   VLS + W          L++
Sbjct: 177 ADHPLAQIE-RPLVLADVREEVQLVVTDASGLTKGRDFN-VLSYKTWRVSDIATKYQLIK 234

Query: 232 SGLGWAYLPQPLVEPLIASGALAEVRFD 259
            GLGW  LP  +V   + +G+L  +  +
Sbjct: 235 GGLGWGGLPASIVRNDLTNGSLKALELE 262