Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 577 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  471 bits (1212), Expect = e-137
 Identities = 268/564 (47%), Positives = 365/564 (64%), Gaps = 51/564 (9%)

Query: 6   LIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLL-PYPL 64
           L++VR L V F+  +   + V G+   +++GETLALVGESG GKS TA ++LRLL P  +
Sbjct: 13  LLDVRGLDVFFLGSNGPVQAVRGLDLTLQRGETLALVGESGCGKSTTALALLRLLAPGAV 72

Query: 65  ARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHK 124
            R   GSI+++G+D+L  S   L+ +RG  I+MIFQEPMTSLNP+H I  QI E L  H+
Sbjct: 73  LR---GSIQFDGRDILALSPAQLREVRGREISMIFQEPMTSLNPVHTIGTQIEETLRRHE 129

Query: 125 GLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEP 184
            L+   A  R +ELLD+V IPEP +R+   PH LSGGQRQRVMIAMA+A +P LL+ADEP
Sbjct: 130 KLSALAARKRAIELLDLVRIPEPHQRIDDHPHNLSGGQRQRVMIAMAVACKPRLLVADEP 189

Query: 185 TTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECAT 244
           TTALDVT+Q +ILELL  L+  + MALLLI+HDL LV + A RV VM  G+ VE+A  + 
Sbjct: 190 TTALDVTIQAQILELLDGLRRELDMALLLITHDLGLVAQWADRVAVMYGGEKVEEASTSR 249

Query: 245 LFSSPQHHYTQMLINA------------------------------------EPS----G 264
           LF++P H YT+ L+ A                                    EP+     
Sbjct: 250 LFAAPSHAYTRGLLGASLHAGSALHYVDARLPEIQTRLDAATGERSFALHVPEPNSKVRA 309

Query: 265 LPAHNPVGAPLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSG 324
           LP       PLL V DL+  +P + G +      + AVDGV+F +  G+T+G+VGESG G
Sbjct: 310 LPVRTAAAEPLLSVQDLRTDYPKRGGGV------LHAVDGVSFDIRAGETVGLVGESGCG 363

Query: 325 KSTLGLAILRLIS-SQGGIRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVAD 383
           KSTL   +LRL++ + G I F G ++  L++KA++P RR +Q+VFQDP+ SL+PR  V D
Sbjct: 364 KSTLSRTLLRLVNPASGRIVFDGTDIAQLSEKALKPWRRRVQMVFQDPYASLNPRRSVFD 423

Query: 384 IVGEGLRIHRIGTAQEQEAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKP 443
           I+   L++H +    E+   I A LE VGL      R+P+EFSGGQRQRI IARALVL+P
Sbjct: 424 IIESVLKVHGVADRAERRNRIAAILERVGLPADAGRRFPNEFSGGQRQRIGIARALVLRP 483

Query: 444 ALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHV 503
           +L++LDEP SALD +VQ Q++ LL  L++ + L+YLFISHDL+VV+ ++ ++MV+  G +
Sbjct: 484 SLVVLDEPVSALDVSVQAQILNLLVELKEDFGLSYLFISHDLSVVRYIADRVMVMSKGQI 543

Query: 504 VEQGDAQAIFHAPQHPYTRQLLEA 527
           VE G  + I+  PQHPYTR L+ A
Sbjct: 544 VETGSHRDIWDRPQHPYTRSLIAA 567



 Score =  199 bits (505), Expect = 3e-55
 Identities = 119/258 (46%), Positives = 157/258 (60%), Gaps = 9/258 (3%)

Query: 6   LIEVRDLAVEFVT-GDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPL 64
           L+ V+DL  ++   G  V   VDGVSFDIR GET+ LVGESG GKS  + ++LRL+    
Sbjct: 320 LLSVQDLRTDYPKRGGGVLHAVDGVSFDIRAGETVGLVGESGCGKSTLSRTLLRLV---- 375

Query: 65  ARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHK 124
               SG I ++G D+ Q SEK L+  R  R+ M+FQ+P  SLNP   +   I  +L +H 
Sbjct: 376 -NPASGRIVFDGTDIAQLSEKALKPWR-RRVQMVFQDPYASLNPRRSVFDIIESVLKVHG 433

Query: 125 GLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEP 184
                E   R   +L+ VG+P    R    P+E SGGQRQR+ IA AL   P L++ DEP
Sbjct: 434 VADRAERRNRIAAILERVGLPADAGR--RFPNEFSGGQRQRIGIARALVLRPSLVVLDEP 491

Query: 185 TTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECAT 244
            +ALDV+VQ +IL LL EL+   G++ L ISHDL++VR IA RV VM +GQIVE      
Sbjct: 492 VSALDVSVQAQILNLLVELKEDFGLSYLFISHDLSVVRYIADRVMVMSKGQIVETGSHRD 551

Query: 245 LFSSPQHHYTQMLINAEP 262
           ++  PQH YT+ LI A P
Sbjct: 552 IWDRPQHPYTRSLIAAVP 569



 Score =  170 bits (430), Expect = 2e-46
 Identities = 104/262 (39%), Positives = 158/262 (60%), Gaps = 14/262 (5%)

Query: 274 PLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAIL 333
           PLL+V  L V+F    G        V+AV G++ +L +G+TL +VGESG GKST  LA+L
Sbjct: 12  PLLDVRGLDVFFLGSNG-------PVQAVRGLDLTLQRGETLALVGESGCGKSTTALALL 64

Query: 334 RLISS----QGGIRFHGQNLEGLNQKAVRPLR-REMQVVFQDPFGSLSPRMCVADIVGEG 388
           RL++     +G I+F G+++  L+   +R +R RE+ ++FQ+P  SL+P   +   + E 
Sbjct: 65  RLLAPGAVLRGSIQFDGRDILALSPAQLREVRGREISMIFQEPMTSLNPVHTIGTQIEET 124

Query: 389 LRIHRIGTAQEQEAAIIAALEEVGL-DPRTR-HRYPHEFSGGQRQRIAIARALVLKPALI 446
           LR H   +A       I  L+ V + +P  R   +PH  SGGQRQR+ IA A+  KP L+
Sbjct: 125 LRRHEKLSALAARKRAIELLDLVRIPEPHQRIDDHPHNLSGGQRQRVMIAMAVACKPRLL 184

Query: 447 LLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQ 506
           + DEPT+ALD T+Q Q++ELL  L+++ ++  L I+HDL +V   + ++ V+  G  VE+
Sbjct: 185 VADEPTTALDVTIQAQILELLDGLRRELDMALLLITHDLGLVAQWADRVAVMYGGEKVEE 244

Query: 507 GDAQAIFHAPQHPYTRQLLEAA 528
                +F AP H YTR LL A+
Sbjct: 245 ASTSRLFAAPSHAYTRGLLGAS 266