Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 540 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  422 bits (1086), Expect = e-122
 Identities = 237/526 (45%), Positives = 330/526 (62%), Gaps = 8/526 (1%)

Query: 5   NLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPL 64
           +L++V  L +    G     +V G+SFDI  GE + +VGESGSGK++ A S++ L P P 
Sbjct: 8   SLLQVSGLTLALADG---KALVHGISFDIAPGEMIGIVGESGSGKTLAARSLIGLAP-PA 63

Query: 65  ARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHK 124
               +GSI ++G+++   S   L+++RG+RI M+FQEPMTSLNP   I +Q++E L LH 
Sbjct: 64  VHRTAGSIVFDGQEVTALSAGALRKLRGSRIGMVFQEPMTSLNPSMAIGRQLDEGLALHT 123

Query: 125 GLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEP 184
            L+  +  AR LE+L+ V I +P   L A PH  SGG RQR+M+A A+   P LLIADEP
Sbjct: 124 TLSPAQRRARILEMLERVRIQDPAAALSAYPHRFSGGMRQRIMLASAMLLRPSLLIADEP 183

Query: 185 TTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECAT 244
           TTALD  VQ ++++L+ EL    G A+L+ISHDL +V R   R+ VM  G+IVE    A 
Sbjct: 184 TTALDAVVQREVMDLMVELTRDHGTAVLMISHDLPMVARYTDRMVVMHHGRIVESNRTAA 243

Query: 245 LFSSPQHHYTQMLINAEPSGLPAHN-PVGAPLLEVDDLKVWFPIKKGFLQRTVDHVKAVD 303
           L S+P+  YT+ L+ A P+  P    P  AP+LEVD L + FP   G L +     +A+ 
Sbjct: 244 LVSAPREDYTRKLLAAMPTRGPVREIPQAAPILEVDGLVLDFPAGGGLLSKRPPK-RALK 302

Query: 304 GVNFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGG-IRFHGQNLEGLNQKAVRPLRR 362
           G++  +  G+ + +VG SGSGK+TLG AI  L+   GG I F G+ +   ++   R  R 
Sbjct: 303 GIDLRIAPGEVVALVGGSGSGKTTLGRAIAGLLQPSGGRILFEGKGIARRSEGWAR-YRA 361

Query: 363 EMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAAIIAALEEVGLDPRTRHRYP 422
           + Q+VFQDP  SL PRM V   +GE L      T   +   I+  L+EV L      RYP
Sbjct: 362 QCQMVFQDPASSLDPRMTVGASIGEALTGMPGLTPAARRGRILEVLQEVSLPAEVASRYP 421

Query: 423 HEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFIS 482
           HE SGGQRQR+AIARA+V +PA I+ DEP SALD TV+ Q++EL   LQ ++  + LFIS
Sbjct: 422 HELSGGQRQRVAIARAVVRRPAFIVADEPVSALDVTVRAQILELFAQLQSRHGFSCLFIS 481

Query: 483 HDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEAA 528
           HDLAVV+ ++ +++V++HG +VEQG    +F  P H YTR+LL AA
Sbjct: 482 HDLAVVEQIADRVIVMRHGEIVEQGPRDEVFDRPHHDYTRELLAAA 527



 Score =  175 bits (443), Expect = 4e-48
 Identities = 112/264 (42%), Positives = 151/264 (57%), Gaps = 17/264 (6%)

Query: 6   LIEVRDLAVEFVTGDQV------NRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRL 59
           ++EV  L ++F  G  +       R + G+   I  GE +ALVG SGSGK+    +I  L
Sbjct: 275 ILEVDGLVLDFPAGGGLLSKRPPKRALKGIDLRIAPGEVVALVGGSGSGKTTLGRAIAGL 334

Query: 60  LPYPLARHPSGS-IRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINE 118
           L       PSG  I +EGK + ++SE    R R  +  M+FQ+P +SL+P   +   I E
Sbjct: 335 L------QPSGGRILFEGKGIARRSEGWA-RYRA-QCQMVFQDPASSLDPRMTVGASIGE 386

Query: 119 ILLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPEL 178
            L    GLT      R LE+L  V +P   +     PHELSGGQRQRV IA A+   P  
Sbjct: 387 ALTGMPGLTPAARRGRILEVLQEVSLPA--EVASRYPHELSGGQRQRVAIARAVVRRPAF 444

Query: 179 LIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVE 238
           ++ADEP +ALDVTV+ +ILEL  +LQ+R G + L ISHDL +V +IA RV VM+ G+IVE
Sbjct: 445 IVADEPVSALDVTVRAQILELFAQLQSRHGFSCLFISHDLAVVEQIADRVIVMRHGEIVE 504

Query: 239 QAECATLFSSPQHHYTQMLINAEP 262
           Q     +F  P H YT+ L+ A P
Sbjct: 505 QGPRDEVFDRPHHDYTRELLAAAP 528