Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 556 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  397 bits (1021), Expect = e-115
 Identities = 230/525 (43%), Positives = 322/525 (61%), Gaps = 8/525 (1%)

Query: 6   LIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLA 65
           L+ V  L +    G +   +V  VSFDI  GE + +VGESGSGK+  A +I+ L P PL 
Sbjct: 11  LVSVEGLTLAVGMGGR--EIVRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPPLV 68

Query: 66  RHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHK- 124
           R  +G I +EG+DL Q     L+ +RG R+ M+FQEPMTSLNP   I KQ+ E L LH+ 
Sbjct: 69  R-TAGRILFEGEDLTQAKPARLRELRGARVGMVFQEPMTSLNPSMTIGKQLVEALALHRR 127

Query: 125 GLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEP 184
            L+      R L++L  VGI +P+  L A PHE SGG RQR+M+A  +  EP LLIADEP
Sbjct: 128 DLSPAARRERILDMLARVGIRDPKGALDAWPHEFSGGMRQRMMLASVMLLEPALLIADEP 187

Query: 185 TTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECAT 244
           TTALD  VQ  +LEL+  L      A+L+ISHDL +V R   R+ VM+ G+++E      
Sbjct: 188 TTALDAVVQRDVLELMVGLTREHRTAVLMISHDLPMVARFTQRMVVMRHGEVMETGRTDD 247

Query: 245 LFSSPQHHYTQMLINAEPSGLPAHN-PVGAPLLEVDDLKVWFPIKKGFLQRTVDHVKAVD 303
           +   P+H YT+ L+ A P  LPA   P  AP++EV +L V +   +    +TV   +A+ 
Sbjct: 248 MLEQPRHAYTRELLQAMPHRLPARQVPDEAPVVEVRNLVVDYAGHRRLFAKTVPK-RALH 306

Query: 304 GVNFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGG-IRFHGQNLEGLNQKAVRPLRR 362
           G++  +   + + +VG SGSGK+TLG  I  L+   GG I F G+ +   +       R 
Sbjct: 307 GIDLVVRPREVVAVVGGSGSGKTTLGRTIAGLLQPSGGEIMFRGRPILR-SDAGWSDYRL 365

Query: 363 EMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAAIIAALEEVGLDPRTRHRYP 422
           + Q+VFQDP+ SL PRM +  +VGEGLR+ +  +  ++   +   LEEVGL      RY 
Sbjct: 366 QCQMVFQDPYASLDPRMTIGQLVGEGLRLVKGMSTADRARRVQEVLEEVGLGTGFAPRYA 425

Query: 423 HEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFIS 482
           HE SGGQRQR+AIARA+V +PA ++ DEP SALD TV+ QV+ L   LQ+++  + LFIS
Sbjct: 426 HELSGGQRQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKRHGFSCLFIS 485

Query: 483 HDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527
           HDL VV+ ++ +++V++ G +VEQG    +F AP   YTR+LL A
Sbjct: 486 HDLGVVEQVADRVVVMQDGRIVEQGSRDTVFDAPTQDYTRKLLSA 530



 Score =  165 bits (418), Expect = 4e-45
 Identities = 109/275 (39%), Positives = 156/275 (56%), Gaps = 31/275 (11%)

Query: 3   EQNLIEVRDLAVEFVTGDQV------NRVVDGVSFDIRKGETLALVGESGSGKSVTAHSI 56
           E  ++EVR+L V++    ++       R + G+   +R  E +A+VG SGSGK+    +I
Sbjct: 276 EAPVVEVRNLVVDYAGHRRLFAKTVPKRALHGIDLVVRPREVVAVVGGSGSGKTTLGRTI 335

Query: 57  LRLLPYPLARHPSGS-IRYEGKDLLQQ----SEKTLQRIRGNRIAMIFQEPMTSLNPLHC 111
             LL       PSG  I + G+ +L+     S+  LQ        M+FQ+P  SL+P   
Sbjct: 336 AGLL------QPSGGEIMFRGRPILRSDAGWSDYRLQ------CQMVFQDPYASLDPRMT 383

Query: 112 IEKQINEILLLHKGLTGKEATARTLELLDMVGIPE---PRKRLKALPHELSGGQRQRVMI 168
           I + + E L L KG++  +   R  E+L+ VG+     PR       HELSGGQRQRV I
Sbjct: 384 IGQLVGEGLRLVKGMSTADRARRVQEVLEEVGLGTGFAPR-----YAHELSGGQRQRVAI 438

Query: 169 AMALANEPELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRV 228
           A A+   P  +IADEP +ALDVTV+ ++L L  ELQ R G + L ISHDL +V ++A RV
Sbjct: 439 ARAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKRHGFSCLFISHDLGVVEQVADRV 498

Query: 229 CVMQRGQIVEQAECATLFSSPQHHYTQMLINAEPS 263
            VMQ G+IVEQ    T+F +P   YT+ L++A P+
Sbjct: 499 VVMQDGRIVEQGSRDTVFDAPTQDYTRKLLSAIPA 533