Pairwise Alignments
Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440
Subject, 539 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440
Score = 390 bits (1003), Expect = e-113
Identities = 233/528 (44%), Positives = 328/528 (62%), Gaps = 3/528 (0%)
Query: 1 MSEQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLL 60
MS+ LIEVRDL+V + Q ++ + +SF + +GETLA+VGESGSGKS A+++L LL
Sbjct: 1 MSQSPLIEVRDLSVSYSFAGQRSQALRQLSFSLVQGETLAVVGESGSGKSTLANALLGLL 60
Query: 61 PYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEIL 120
P AR G + +G D+ Q SE+ +++RG I ++ Q+PM SLNP I +QI E L
Sbjct: 61 PGN-ARIDQGQLWVDGVDMAQASERARRQLRGRTIGLVPQDPMVSLNPTQRIGQQIAEAL 119
Query: 121 LLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLI 180
L +G A+ L LLD VG+ EP R + PHELSGG RQRV+IA+ALA EP L+I
Sbjct: 120 QLARGRRYPGQEAKVLALLDQVGLDEPALRARQYPHELSGGMRQRVLIAIALAGEPRLII 179
Query: 181 ADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA 240
ADEPT+ALDVTVQ +IL+ L+ L A G++LL+I+HDL + A R+ VM++G+ VE
Sbjct: 180 ADEPTSALDVTVQRRILDHLQLLVAERGISLLIITHDLGMACDRADRLLVMKQGEQVEHG 239
Query: 241 ECATLFSSPQHHYTQMLINAEPSGLPAHNPVGAPLLEVDDLKVWFPIKKGFLQRTVDHVK 300
+ + YT+ L++A P+ +P P AP + L++ K+ L +H
Sbjct: 240 SPRQILWGARQPYTRALLDAAPAFVPRRRP-AAPRGQTPLLRLSHVGKRFELPGKNEHYT 298
Query: 301 AVDGVNFSLPQGQTLGIVGESGSGKST-LGLAILRLISSQGGIRFHGQNLEGLNQKAVRP 359
A+ ++ L GQTL IVGESGSGKST L +A+ SQG + F G+++ G RP
Sbjct: 299 ALHDLSLELHAGQTLAIVGESGSGKSTALRIALGLEKPSQGQVVFAGEDVTGYTWSQFRP 358
Query: 360 LRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAAIIAALEEVGLDPRTRH 419
LRR +Q+V Q+PF +L PR V D V E L + + E + V L +
Sbjct: 359 LRRRIQLVQQNPFAALDPRFTVFDSVVEPLVSFGLLRGEALERKARELITRVQLPVQFLD 418
Query: 420 RYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYL 479
R P E SGGQRQR+AIARAL L+P ++LLDEP SALD +VQ Q++ LL LQ++ + Y+
Sbjct: 419 RLPRELSGGQRQRVAIARALALEPEVLLLDEPVSALDVSVQAQILALLDELQRELGMAYV 478
Query: 480 FISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527
+SHDLAVV +++ Q++V++ G VVEQG A + YTR L++A
Sbjct: 479 LVSHDLAVVASMADQVLVLRRGQVVEQGPALQVLSKSASAYTRALIDA 526
Score = 174 bits (441), Expect = 8e-48
Identities = 113/264 (42%), Positives = 162/264 (61%), Gaps = 15/264 (5%)
Query: 273 APLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAI 332
+PL+EV DL V + QR+ +A+ ++FSL QG+TL +VGESGSGKSTL A+
Sbjct: 4 SPLIEVRDLSVSYSFAG---QRS----QALRQLSFSLVQGETLAVVGESGSGKSTLANAL 56
Query: 333 LRLISS-----QGGIRFHGQNLEGLNQKAVRPLR-REMQVVFQDPFGSLSPRMCVADIVG 386
L L+ QG + G ++ +++A R LR R + +V QDP SL+P + +
Sbjct: 57 LGLLPGNARIDQGQLWVDGVDMAQASERARRQLRGRTIGLVPQDPMVSLNPTQRIGQQIA 116
Query: 387 EGLRIHRIGTAQEQEAAIIAALEEVGLD-PRTRHR-YPHEFSGGQRQRIAIARALVLKPA 444
E L++ R QEA ++A L++VGLD P R R YPHE SGG RQR+ IA AL +P
Sbjct: 117 EALQLARGRRYPGQEAKVLALLDQVGLDEPALRARQYPHELSGGMRQRVLIAIALAGEPR 176
Query: 445 LILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVV 504
LI+ DEPTSALD TVQR++++ L+ L + ++ L I+HDL + + +L+V+K G V
Sbjct: 177 LIIADEPTSALDVTVQRRILDHLQLLVAERGISLLIITHDLGMACDRADRLLVMKQGEQV 236
Query: 505 EQGDAQAIFHAPQHPYTRQLLEAA 528
E G + I + PYTR LL+AA
Sbjct: 237 EHGSPRQILWGARQPYTRALLDAA 260
Score = 159 bits (401), Expect = 3e-43
Identities = 99/243 (40%), Positives = 142/243 (58%), Gaps = 8/243 (3%)
Query: 29 VSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIRYEGKDLLQQSEKTLQ 88
+S ++ G+TLA+VGESGSGKS L L + G + + G+D+ + +
Sbjct: 303 LSLELHAGQTLAIVGESGSGKSTALRIALGL-----EKPSQGQVVFAGEDVTGYTWSQFR 357
Query: 89 RIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKEATARTLELLDMVGIPEPR 148
+R RI ++ Q P +L+P + + E L+ L G+ + EL+ V +P
Sbjct: 358 PLR-RRIQLVQQNPFAALDPRFTVFDSVVEPLVSFGLLRGEALERKARELITRVQLPV-- 414
Query: 149 KRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARMG 208
+ L LP ELSGGQRQRV IA ALA EPE+L+ DEP +ALDV+VQ +IL LL ELQ +G
Sbjct: 415 QFLDRLPRELSGGQRQRVAIARALALEPEVLLLDEPVSALDVSVQAQILALLDELQRELG 474
Query: 209 MALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECATLFSSPQHHYTQMLINAEPSGLPAH 268
MA +L+SHDL +V +A +V V++RGQ+VEQ + S YT+ LI+A P +
Sbjct: 475 MAYVLVSHDLAVVASMADQVLVLRRGQVVEQGPALQVLSKSASAYTRALIDAIPGHSRSM 534
Query: 269 NPV 271
PV
Sbjct: 535 LPV 537