Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 629 a.a., dipeptide ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235

 Score =  469 bits (1207), Expect = e-136
 Identities = 253/559 (45%), Positives = 360/559 (64%), Gaps = 35/559 (6%)

Query: 4   QNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYP 63
           Q ++++  + V F  G+     V  +S  + +GETLA+VGESGSGKSVT+ +++RL+ + 
Sbjct: 17  QRVVDIDSMTVAFRRGETTFNAVRDLSLTVDRGETLAIVGESGSGKSVTSLALMRLVEHG 76

Query: 64  LARHPSGSIRYEGK-----DLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINE 118
             +  +GSI +  +     DL+Q S+ T++ +RG  IAMIFQEPMTSLNP+  +  QI E
Sbjct: 77  GGKIANGSIAFRRRNGSVLDLVQASQATMRSVRGADIAMIFQEPMTSLNPVFTVGDQIGE 136

Query: 119 ILLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPEL 178
            + LH+  +  EA A TL LLD+V IPE R+     PH+LSGG RQRVMIAMAL+ +P L
Sbjct: 137 AIALHQNKSRSEAHAETLRLLDLVRIPEARRVAARYPHQLSGGMRQRVMIAMALSCKPSL 196

Query: 179 LIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVE 238
           LIADEPTTALDVT+Q +IL+L++ LQ  M M ++ I+HD+ +V  +A RV VM RG  VE
Sbjct: 197 LIADEPTTALDVTIQAQILQLIRGLQDEMNMGVIFITHDMGVVAEVADRVLVMYRGDKVE 256

Query: 239 QAECATLFSSPQHHYTQMLINAEP-------SGLPA----------------------HN 269
           + E A LF++P H YT+ L+ A P       +  PA                        
Sbjct: 257 EGESAQLFAAPAHPYTKALLAAVPKLGSMQGTDAPAKFSLLTLDGEQAKAAPEAQAQTQT 316

Query: 270 PVGAPLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLG 329
               P+L V DL   FP++ G   +    V AV+ V+F L  G+TL +VGESG GKST G
Sbjct: 317 QAAQPVLRVRDLVTRFPVRSGLFSKLTGRVHAVERVSFDLHAGETLALVGESGCGKSTTG 376

Query: 330 LAILRLISSQGG-IRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEG 388
            ++LRL+ SQ G I F G+++  L+  +++ LRR++Q +FQDPF SL+PR+ V   + E 
Sbjct: 377 RSLLRLVESQSGSIEFDGKDISSLSGPSLQALRRDIQFIFQDPFASLNPRLTVGFSIMEP 436

Query: 389 LRIHRIGTAQEQEAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILL 448
           L +H + + +E +A +   L++VGL      RYPHEFSGGQRQRIAIARAL L P +++ 
Sbjct: 437 LLVHNVASGKEAQARVAWLLDKVGLPADAARRYPHEFSGGQRQRIAIARALALNPKVVIA 496

Query: 449 DEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGD 508
           DE  SALD +VQ Q+V L+ +LQ++  + YLFISHD+AVV+ +SH++ V+  G +VE G 
Sbjct: 497 DESVSALDVSVQAQIVNLMLDLQRELGVAYLFISHDMAVVERISHRVAVMYLGQIVEIGP 556

Query: 509 AQAIFHAPQHPYTRQLLEA 527
            +A+F +PQHPYT++L+ A
Sbjct: 557 RRAVFESPQHPYTKKLMGA 575



 Score =  218 bits (554), Expect = 7e-61
 Identities = 137/300 (45%), Positives = 179/300 (59%), Gaps = 24/300 (8%)

Query: 4   QNLIEVRDLAVEF-----VTGDQVNRV--VDGVSFDIRKGETLALVGESGSGKSVTAHSI 56
           Q ++ VRDL   F     +      RV  V+ VSFD+  GETLALVGESG GKS T  S+
Sbjct: 320 QPVLRVRDLVTRFPVRSGLFSKLTGRVHAVERVSFDLHAGETLALVGESGCGKSTTGRSL 379

Query: 57  LRLLPYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQI 116
           LRL+        SGSI ++GKD+   S  +LQ +R + I  IFQ+P  SLNP   +   I
Sbjct: 380 LRLV-----ESQSGSIEFDGKDISSLSGPSLQALRRD-IQFIFQDPFASLNPRLTVGFSI 433

Query: 117 NEILLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEP 176
            E LL+H   +GKEA AR   LLD VG+P    R    PHE SGGQRQR+ IA ALA  P
Sbjct: 434 MEPLLVHNVASGKEAQARVAWLLDKVGLPADAAR--RYPHEFSGGQRQRIAIARALALNP 491

Query: 177 ELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQI 236
           +++IADE  +ALDV+VQ +I+ L+ +LQ  +G+A L ISHD+ +V RI+HRV VM  GQI
Sbjct: 492 KVVIADESVSALDVSVQAQIVNLMLDLQRELGVAYLFISHDMAVVERISHRVAVMYLGQI 551

Query: 237 VEQAECATLFSSPQHHYTQMLINAEPSGLPAH---------NPVGAPLLEVDDLKVWFPI 287
           VE      +F SPQH YT+ L+ A P   PA          + + +P+  +DD  V  P+
Sbjct: 552 VEIGPRRAVFESPQHPYTKKLMGAVPVADPARRHAKRMLAADELPSPIRSLDDEPVVAPL 611



 Score =  179 bits (455), Expect = 2e-49
 Identities = 104/283 (36%), Positives = 166/283 (58%), Gaps = 21/283 (7%)

Query: 259 NAEPSGLPAHNPVGAPLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIV 318
           N + +  P  N     ++++D + V F       +R      AV  ++ ++ +G+TL IV
Sbjct: 3   NTQKTPRPLDNLPPQRVVDIDSMTVAF-------RRGETTFNAVRDLSLTVDRGETLAIV 55

Query: 319 GESGSGKSTLGLAILRLISSQGG------IRFHGQN-----LEGLNQKAVRPLR-REMQV 366
           GESGSGKS   LA++RL+   GG      I F  +N     L   +Q  +R +R  ++ +
Sbjct: 56  GESGSGKSVTSLALMRLVEHGGGKIANGSIAFRRRNGSVLDLVQASQATMRSVRGADIAM 115

Query: 367 VFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAAIIAALEEVGLDP--RTRHRYPHE 424
           +FQ+P  SL+P   V D +GE + +H+  +  E  A  +  L+ V +    R   RYPH+
Sbjct: 116 IFQEPMTSLNPVFTVGDQIGEAIALHQNKSRSEAHAETLRLLDLVRIPEARRVAARYPHQ 175

Query: 425 FSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHD 484
            SGG RQR+ IA AL  KP+L++ DEPT+ALD T+Q Q+++L+R LQ + N+  +FI+HD
Sbjct: 176 LSGGMRQRVMIAMALSCKPSLLIADEPTTALDVTIQAQILQLIRGLQDEMNMGVIFITHD 235

Query: 485 LAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527
           + VV  ++ +++V+  G  VE+G++  +F AP HPYT+ LL A
Sbjct: 236 MGVVAEVADRVLVMYRGDKVEEGESAQLFAAPAHPYTKALLAA 278