Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 529 a.a., fused predicted oligopeptide transporter subunits of ABC superfamilly: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  602 bits (1553), Expect = e-177
 Identities = 314/524 (59%), Positives = 397/524 (75%), Gaps = 2/524 (0%)

Query: 4   QNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYP 63
           Q L+ + +L+V F     V  VV+ VS  I  GETLALVGESGSGKSVTA SILRLLP P
Sbjct: 3   QTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSP 62

Query: 64  LARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLH 123
              + SG IR+ G+ LL  S++TL+ +RGN+IAMIFQEPM SLNPLH +EKQ+ E+L LH
Sbjct: 63  PVEYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLH 122

Query: 124 KGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADE 183
           +G+  + A    L  LD VGI +  KRL   PH+LSGG+RQRVMIAMAL   PELLIADE
Sbjct: 123 RGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADE 182

Query: 184 PTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECA 243
           PTTALDV+VQ +IL+LL+ELQ  + M +L I+H+L++VR++AHRV VMQ G+ VEQ   A
Sbjct: 183 PTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNYAA 242

Query: 244 TLFSSPQHHYTQMLINAEPSGLPAHNPVGA-PLLEVDDLKVWFPIKKGFLQRTVDHVKAV 302
           TLF+SP H YTQ L+N+EPSG P   P  A  LL+V+ L+V FPI+KG L+R VDH   V
Sbjct: 243 TLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLLDVEQLQVAFPIRKGILKRIVDHNVVV 302

Query: 303 DGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGGIRFHGQNLEGLNQKAVRPLRR 362
             ++F+L  G+TLG+VGESGSGKST GLA+LRLI+SQG I F GQ L+ LN++ + P+R 
Sbjct: 303 KNISFTLRAGETLGLVGESGSGKSTTGLALLRLINSQGSIIFDGQPLQNLNRRQLLPIRH 362

Query: 363 EMQVVFQDPFGSLSPRMCVADIVGEGLRIHR-IGTAQEQEAAIIAALEEVGLDPRTRHRY 421
            +QVVFQDP  SL+PR+ V  I+ EGLR+H+   +A ++E  +IA + EVGLDP TRHRY
Sbjct: 363 RIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMHEVGLDPETRHRY 422

Query: 422 PHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFI 481
           P EFSGGQRQRIAIARAL+LKP+LI+LDEPTS+LD+TVQ Q++ LL++LQQK+ L YLFI
Sbjct: 423 PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYLFI 482

Query: 482 SHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLL 525
           SHDL VV+AL HQ+++++ G VVEQG    +F  PQ  YTRQLL
Sbjct: 483 SHDLHVVRALCHQVIILRQGEVVEQGPCARVFATPQQEYTRQLL 526



 Score =  182 bits (461), Expect = 4e-50
 Identities = 105/262 (40%), Positives = 166/262 (63%), Gaps = 16/262 (6%)

Query: 275 LLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILR 334
           LL +++L V F       Q+TV  V  V+ V+  +  G+TL +VGESGSGKS   L+ILR
Sbjct: 5   LLAIENLSVGFRH-----QQTVRTV--VNDVSLQIEAGETLALVGESGSGKSVTALSILR 57

Query: 335 LISS------QGGIRFHGQNLEGLNQKAVRPLR-REMQVVFQDPFGSLSPRMCVADIVGE 387
           L+ S       G IRFHG++L   + + +R +R  ++ ++FQ+P  SL+P   +   + E
Sbjct: 58  LLPSPPVEYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYE 117

Query: 388 GLRIHRIGTAQEQEAAIIAALEEVGLDPRTRHR--YPHEFSGGQRQRIAIARALVLKPAL 445
            L +HR    +     I+  L+ VG+    +    YPH+ SGG+RQR+ IA AL+ +P L
Sbjct: 118 VLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPEL 177

Query: 446 ILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVE 505
           ++ DEPT+ALD +VQ Q+++LLR LQ + N+  LFI+H+L++V+ L+H++ V+++G  VE
Sbjct: 178 LIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVE 237

Query: 506 QGDAQAIFHAPQHPYTRQLLEA 527
           Q  A  +F +P HPYT++LL +
Sbjct: 238 QNYAATLFASPTHPYTQKLLNS 259