Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 530 a.a., microcin C ABC transporter ATP-binding protein YejF from Dickeya dadantii 3937

 Score =  595 bits (1533), Expect = e-174
 Identities = 307/528 (58%), Positives = 397/528 (75%), Gaps = 3/528 (0%)

Query: 1   MSEQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLL 60
           MS   L+E+RDL++ F  G Q  +VVD VS  I  GETLALVGESGSGKSVTA S+LRLL
Sbjct: 1   MSAHPLLEIRDLSIAFRNGGQQRQVVDRVSLSIEAGETLALVGESGSGKSVTALSVLRLL 60

Query: 61  PYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEIL 120
           P P   +P G I + G+ LL  SE+ L+++RG+RIAMIFQEPM SLNPLH IEKQ+ E+L
Sbjct: 61  PSPPVVYPHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAEVL 120

Query: 121 LLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLI 180
            LH+G+  + A    +  L+ VGI +P +RL   PH+LSGG+RQRVMIAMAL  +P+LLI
Sbjct: 121 SLHRGMRHEAARGEIVGCLERVGIRQPARRLADFPHQLSGGERQRVMIAMALLTQPDLLI 180

Query: 181 ADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA 240
           ADEPTTALDVTVQ +IL LL EL+  + M LL I+H+LN+VRR+A RV VMQ G+ VEQ 
Sbjct: 181 ADEPTTALDVTVQAQILALLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQN 240

Query: 241 ECATLFSSPQHHYTQMLINAEPSG--LPAHNPVGAPLLEVDDLKVWFPIKKGFLQRTVDH 298
           +   LFS+PQH YT+ L++AEP+G  LP      + LL+V +L V FPI++G L+RTV  
Sbjct: 241 QTRELFSAPQHPYTRQLLDAEPTGEALPLEQ-AASTLLDVRELGVSFPIRRGLLRRTVGE 299

Query: 299 VKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGGIRFHGQNLEGLNQKAVR 358
              +  ++FSL +G+++G+VGESGSGKST GLA+LRL+ S+G I F GQ L   N+K + 
Sbjct: 300 KPVLQALSFSLRRGESIGLVGESGSGKSTTGLALLRLLRSRGEIWFDGQPLHRFNRKQML 359

Query: 359 PLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAAIIAALEEVGLDPRTR 418
           P+RR +QVVFQDP GSL+PR+ V  I+ EGLR+H   +  EQ   +I A++EVGLDP +R
Sbjct: 360 PVRRRIQVVFQDPNGSLNPRLNVEQIIAEGLRVHHRSSPAEQTQRVIQAMQEVGLDPDSR 419

Query: 419 HRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTY 478
           HRYP EFSGGQRQRIAIARAL+L+P L++LDEPTS+LDRTVQ Q++ LL+ LQQ + L Y
Sbjct: 420 HRYPSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILALLKTLQQTHQLAY 479

Query: 479 LFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLE 526
           LFISHDL VV++L HQ++V++HG VVEQG+ + +F  PQ  YTRQLL+
Sbjct: 480 LFISHDLHVVRSLCHQVIVLRHGEVVEQGECRQLFEHPQQDYTRQLLQ 527



 Score =  191 bits (485), Expect = 6e-53
 Identities = 110/263 (41%), Positives = 165/263 (62%), Gaps = 16/263 (6%)

Query: 274 PLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAIL 333
           PLLE+ DL + F  + G  QR V     VD V+ S+  G+TL +VGESGSGKS   L++L
Sbjct: 5   PLLEIRDLSIAF--RNGGQQRQV-----VDRVSLSIEAGETLALVGESGSGKSVTALSVL 57

Query: 334 RLISS------QGGIRFHGQNLEGLNQKAVRPLRRE-MQVVFQDPFGSLSPRMCVADIVG 386
           RL+ S       G I F G++L   +++ +R +R + + ++FQ+P  SL+P   +   + 
Sbjct: 58  RLLPSPPVVYPHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLA 117

Query: 387 EGLRIHRIGTAQEQEAAIIAALEEVGLDPRTRHR--YPHEFSGGQRQRIAIARALVLKPA 444
           E L +HR    +     I+  LE VG+    R    +PH+ SGG+RQR+ IA AL+ +P 
Sbjct: 118 EVLSLHRGMRHEAARGEIVGCLERVGIRQPARRLADFPHQLSGGERQRVMIAMALLTQPD 177

Query: 445 LILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVV 504
           L++ DEPT+ALD TVQ Q++ LL  L+Q+ N+  LFI+H+L +V+ L+ ++ V++ G  V
Sbjct: 178 LLIADEPTTALDVTVQAQILALLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCV 237

Query: 505 EQGDAQAIFHAPQHPYTRQLLEA 527
           EQ   + +F APQHPYTRQLL+A
Sbjct: 238 EQNQTRELFSAPQHPYTRQLLDA 260