Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 555 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58

 Score =  441 bits (1133), Expect = e-128
 Identities = 256/560 (45%), Positives = 348/560 (62%), Gaps = 47/560 (8%)

Query: 6   LIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLA 65
           L+ VRDL+V + +       V+ +SFDI  GE +ALVGESG GKS TA ++  LLP   +
Sbjct: 5   LLGVRDLSVRYHSRSGEAVAVENLSFDIAAGEAVALVGESGCGKSTTALALSNLLPDEAS 64

Query: 66  RHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKG 125
              SG + ++G DL +   K  + I G RI MIFQEPM++LNP++ +  QI E+L  H+ 
Sbjct: 65  S--SGEVTFDGLDLFRLPPKAWRPILGPRIGMIFQEPMSALNPVYTVGDQIAEVLHAHER 122

Query: 126 LTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPT 185
           L+ K A +R LELLD+V +PEP +R+ + PHELSGGQRQR MIA A+A  P LLIADEPT
Sbjct: 123 LSRKAARSRVLELLDLVSMPEPHRRIASYPHELSGGQRQRAMIAQAIALTPLLLIADEPT 182

Query: 186 TALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECATL 245
           TALD T+Q +ILEL+  L+  + M LLLISHDL LV R   RV VM  G+ +E+ +   L
Sbjct: 183 TALDSTIQSQILELIDRLRRDLSMGLLLISHDLTLVSRWTDRVVVMHNGKRMEELKAEHL 242

Query: 246 FSSPQHHYTQMLINAE-----------------------------------PSGLPAHNP 270
           F   QH YT+ LI A                                     +  P  N 
Sbjct: 243 FQESQHPYTKGLIGASIRLGDGRHASSERLNEIRTHRNSNGTTSFEIRSPPVAAEPRTNA 302

Query: 271 VGAPLLEVDDLKVWF-PIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLG 329
               LLEV+DL V + P  K           AVD V F L +G+TLG+VGESGSGKS+L 
Sbjct: 303 TADALLEVEDLTVRYDPASK--------TPPAVDRVTFELLRGETLGLVGESGSGKSSLS 354

Query: 330 LAILRLISSQGG-IRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEG 388
            A+ RLI   GG I F GQ++       +R  R  +Q++FQDP+ SL+PR  V DI+   
Sbjct: 355 KALSRLIPVAGGQILFEGQDITHAGGADLRAFRGRVQMIFQDPYSSLNPRRTVGDILDSV 414

Query: 389 LRIHRIGTAQEQEAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILL 448
           L  H+   + ++++ I  AL++V L      R+PHEFSGGQRQRIAIARAL+++P+L++ 
Sbjct: 415 LHAHKYRNSADRQSRISEALDQVRLPRSAVERFPHEFSGGQRQRIAIARALIVRPSLVIC 474

Query: 449 DEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGD 508
           DEP SALD +VQ Q++ LL +L+++  L+YLFISHDLAVVK +S ++MV+K GH++E+G+
Sbjct: 475 DEPVSALDVSVQAQILNLLADLKEEAGLSYLFISHDLAVVKYISDRIMVMKDGHIIERGN 534

Query: 509 AQAIFHAPQHPYTRQLLEAA 528
            Q ++  P H YTR+L+ AA
Sbjct: 535 HQNLWSNPSHEYTRKLIAAA 554



 Score =  165 bits (417), Expect = 5e-45
 Identities = 99/262 (37%), Positives = 154/262 (58%), Gaps = 14/262 (5%)

Query: 274 PLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAIL 333
           PLL V DL V +  + G          AV+ ++F +  G+ + +VGESG GKST  LA+ 
Sbjct: 4   PLLGVRDLSVRYHSRSG-------EAVAVENLSFDIAAGEAVALVGESGCGKSTTALALS 56

Query: 334 RLI----SSQGGIRFHGQNLEGLNQKAVRP-LRREMQVVFQDPFGSLSPRMCVADIVGEG 388
            L+    SS G + F G +L  L  KA RP L   + ++FQ+P  +L+P   V D + E 
Sbjct: 57  NLLPDEASSSGEVTFDGLDLFRLPPKAWRPILGPRIGMIFQEPMSALNPVYTVGDQIAEV 116

Query: 389 LRIHRIGTAQEQEAAIIAALEEVGL-DPRTR-HRYPHEFSGGQRQRIAIARALVLKPALI 446
           L  H   + +   + ++  L+ V + +P  R   YPHE SGGQRQR  IA+A+ L P L+
Sbjct: 117 LHAHERLSRKAARSRVLELLDLVSMPEPHRRIASYPHELSGGQRQRAMIAQAIALTPLLL 176

Query: 447 LLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQ 506
           + DEPT+ALD T+Q Q++EL+  L++  ++  L ISHDL +V   + +++V+ +G  +E+
Sbjct: 177 IADEPTTALDSTIQSQILELIDRLRRDLSMGLLLISHDLTLVSRWTDRVVVMHNGKRMEE 236

Query: 507 GDAQAIFHAPQHPYTRQLLEAA 528
             A+ +F   QHPYT+ L+ A+
Sbjct: 237 LKAEHLFQESQHPYTKGLIGAS 258