Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 539 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

 Score =  431 bits (1107), Expect = e-125
 Identities = 241/527 (45%), Positives = 334/527 (63%), Gaps = 16/527 (3%)

Query: 5   NLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPL 64
           +L+EVR+L+V+F T     + V  +S+ + +GETLA++GESGSGKSV++ +I+ L+  P 
Sbjct: 4   HLLEVRNLSVDFYTATGTVKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLIDMPP 63

Query: 65  ARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHK 124
            +  SG I   GKDLL+ S    + + G  IAMIFQ+P++ LNP++ +  Q+ E L  H 
Sbjct: 64  GKISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALRTH- 122

Query: 125 GLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEP 184
           G+  ++A    L L   V +PEP K +   PHE SGGQRQRVMIAMALA +P LLIADEP
Sbjct: 123 GIDNRQAQVEALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLIADEP 182

Query: 185 TTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECAT 244
           TTALDVTVQ ++L LLKELQ   GM +L+I+HDL +V  +A RV VM++G +VE      
Sbjct: 183 TTALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESGTVRE 242

Query: 245 LFSSPQHHYTQMLINAEPSGLPAHNPV--GAPLLEVDDLKVWFPIKKGFLQRTVDHVKAV 302
           ++ +PQH YT+ LI A P     H P   G P+L+V + +           ++    +A+
Sbjct: 243 VYRNPQHPYTKKLIAAAPGKGQLHEPSTDGEPILKVRNAR-----------KSYGGFEAL 291

Query: 303 DGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGG-IRFHGQNLEGLNQKAVRPLR 361
            G++F L  G+T+ +VGESGSGKSTL   +LRL     G   + GQ+L  L+   +  LR
Sbjct: 292 KGISFDLKAGETVAVVGESGSGKSTLARILLRLDDPDSGTAHWKGQDLFTLSPSELFKLR 351

Query: 362 REMQVVFQDPFGSLSPRMCVADIVGEGLRIH-RIGTAQEQEAAIIAALEEVGLDPRTRHR 420
           R++Q+VFQDP  SL+PRM V  ++ E   IH  I    +  A     LE VGL P    R
Sbjct: 352 RDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPEILPKAKWRARAAELLERVGLSPEHMGR 411

Query: 421 YPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLF 480
           YPH+FSGGQRQRIAIARAL L+P LI+ DE  SALD +VQ QVV LL  L+++  + ++F
Sbjct: 412 YPHQFSGGQRQRIAIARALALEPQLIVCDEAVSALDVSVQAQVVRLLDKLRREMGIAFIF 471

Query: 481 ISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527
           I+HDL +V+  +  +MV++ G VVE G    +F  PQ  YT+ L+ A
Sbjct: 472 IAHDLPLVRDFADYVMVMQKGEVVEFGTVAQVFDNPQQRYTQALISA 518



 Score =  173 bits (438), Expect = 2e-47
 Identities = 107/262 (40%), Positives = 156/262 (59%), Gaps = 15/262 (5%)

Query: 275 LLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILR 334
           LLEV +L V F    G        VKAV  +++ + +G+TL I+GESGSGKS    AI+ 
Sbjct: 5   LLEVRNLSVDFYTATGT-------VKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMN 57

Query: 335 LIS------SQGGIRFHGQNLEGLNQKAVRPLR-REMQVVFQDPFGSLSPRMCVADIVGE 387
           LI       S G I  +G++L  ++    R +  R + ++FQDP   L+P   V   + E
Sbjct: 58  LIDMPPGKISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMRE 117

Query: 388 GLRIHRIGTAQEQEAAIIAALEEVGLDP-RTRHRYPHEFSGGQRQRIAIARALVLKPALI 446
            LR H I   Q Q  A+         +P +   +YPHEFSGGQRQR+ IA AL LKP L+
Sbjct: 118 ALRTHGIDNRQAQVEALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLL 177

Query: 447 LLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQ 506
           + DEPT+ALD TVQ +V+ LL+ LQ++  +  L I+HDL VV  ++ +++V++ G +VE 
Sbjct: 178 IADEPTTALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVES 237

Query: 507 GDAQAIFHAPQHPYTRQLLEAA 528
           G  + ++  PQHPYT++L+ AA
Sbjct: 238 GTVREVYRNPQHPYTKKLIAAA 259