Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 603 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  472 bits (1215), Expect = e-137
 Identities = 261/556 (46%), Positives = 355/556 (63%), Gaps = 30/556 (5%)

Query: 1   MSEQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLL 60
           M  + ++ VR+L   F+   +   VV  VSFD++ GET+A+VGESGSGKSVT+ S++RLL
Sbjct: 1   METKPVLSVRNLTTSFLVDGEWKSVVRDVSFDVKSGETVAIVGESGSGKSVTSLSLMRLL 60

Query: 61  PYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEIL 120
             P + H  G +   G++LL  SE+ ++ +RGN I+MIFQEPMTSLNP+  I +QI+E+L
Sbjct: 61  A-PASSHIEGEVLLNGRNLLTLSEREMRGVRGNDISMIFQEPMTSLNPIFTIGRQISEVL 119

Query: 121 LLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLI 180
           + HKGL+ +EA A T+ LL+ V IP    R    PH+ SGG RQRVMIAMALA+ P+LLI
Sbjct: 120 IRHKGLSKQEARAETVRLLEKVRIPNAASRFDEYPHQFSGGMRQRVMIAMALASRPKLLI 179

Query: 181 ADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA 240
           ADEPTTALDVT+Q +IL+L+K LQ   GM++L I+HD+ +V  IA R  VM RG  VE  
Sbjct: 180 ADEPTTALDVTIQGQILDLIKLLQEEEGMSVLFITHDMGVVAEIADRTIVMYRGDAVETG 239

Query: 241 ECATLFSSPQHHYTQMLINAEPS-------GLPAHNPV---------------------G 272
               +F   QH YT+ L++A P          P   PV                      
Sbjct: 240 ATEDIFRRGQHPYTRALLSAVPKLGSMHDRQWPTRFPVLDLKTGLSTEPQEVAETVACGQ 299

Query: 273 APLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAI 332
            P+L V +L   FPI+ G   R    V AV+ V+F L QG+TL +VGESG GKST G +I
Sbjct: 300 TPVLSVKNLVTRFPIRSGLWARQTGAVHAVENVSFDLFQGETLSLVGESGCGKSTTGRSI 359

Query: 333 LRLIS-SQGGIRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRI 391
           +RL+  S G +   G ++  L+   +R +R+ +Q++FQDPF SL+PRM V   + E    
Sbjct: 360 MRLVEPSSGDVSLDGYDVMRLDTVGLRNMRKSVQMIFQDPFSSLNPRMTVGTAISEPFIK 419

Query: 392 HRIGTAQEQEAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEP 451
           HR+G+ ++ +      LE+VGL     +RYPHEFSGGQRQRIAIARAL L P +I+ DE 
Sbjct: 420 HRLGSTKQAKEKTADLLEKVGLSADMANRYPHEFSGGQRQRIAIARALALDPKVIVADES 479

Query: 452 TSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQA 511
            SALD +++ QV  LL +LQQ  NL +LFISHD+AVV+ +SH++ V+  G +VE G   A
Sbjct: 480 VSALDVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAA 539

Query: 512 IFHAPQHPYTRQLLEA 527
           +F  PQHPYT++L+ A
Sbjct: 540 VFDNPQHPYTKKLMAA 555



 Score =  187 bits (475), Expect = 1e-51
 Identities = 111/277 (40%), Positives = 168/277 (60%), Gaps = 11/277 (3%)

Query: 26  VDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIRYEGKDLLQQSEK 85
           V+ VSFD+ +GETL+LVGESG GKS T  SI+RL+        SG +  +G D+++    
Sbjct: 329 VENVSFDLFQGETLSLVGESGCGKSTTGRSIMRLV-----EPSSGDVSLDGYDVMRLDTV 383

Query: 86  TLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKEATARTLELLDMVGIP 145
            L+ +R + + MIFQ+P +SLNP   +   I+E  + H+  + K+A  +T +LL+ VG+ 
Sbjct: 384 GLRNMRKS-VQMIFQDPFSSLNPRMTVGTAISEPFIKHRLGSTKQAKEKTADLLEKVGLS 442

Query: 146 EPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQA 205
                    PHE SGGQRQR+ IA ALA +P++++ADE  +ALDV+++ ++  LL +LQ 
Sbjct: 443 ADMAN--RYPHEFSGGQRQRIAIARALALDPKVIVADESVSALDVSIKAQVCNLLLDLQQ 500

Query: 206 RMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECATLFSSPQHHYTQMLINAEPSGL 265
            + +A L ISHD+ +V R++HRV VM  G+IVE    A +F +PQH YT+ L+ A P   
Sbjct: 501 SLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAVFDNPQHPYTKKLMAAVPVPD 560

Query: 266 PAHNPVGAPLLEVDDLKVWFPIKKGFLQRTVDHVKAV 302
           PA   +   +   D+LK   PI+    +    H + V
Sbjct: 561 PARRGMRRGISN-DELK--SPIRTMSYEAPTRHYRTV 594