Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 616 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  446 bits (1147), Expect = e-129
 Identities = 253/551 (45%), Positives = 341/551 (61%), Gaps = 30/551 (5%)

Query: 6   LIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLA 65
           ++ V++L   F        VV  +SFDI   ET+A+VGESGSGKSVT+ SI+RLL    +
Sbjct: 18  VLSVQNLTTSFRVDGGWKSVVRNMSFDIAPRETVAIVGESGSGKSVTSLSIMRLLDRKTS 77

Query: 66  RHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKG 125
           R   G +   G+DLL   E+ ++++RG  I+MIFQEPMTSLNP+  I KQI E L +H+ 
Sbjct: 78  RI-EGKVMLGGRDLLALPEEEMRKVRGKDISMIFQEPMTSLNPIFPIGKQIAEALTVHQD 136

Query: 126 LTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPT 185
           ++   A A  + LL+ V IP    R    PH+ SGG RQRVMIAMALA++P+LLIADEPT
Sbjct: 137 ISSSAAKAEVIRLLEKVRIPNAASRFGDYPHQFSGGMRQRVMIAMALASKPKLLIADEPT 196

Query: 186 TALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECATL 245
           TALDVT+Q +IL+L+K+LQ   GM++L I+HD+ +V  +A R  VM RG +VE      +
Sbjct: 197 TALDVTIQGQILDLIKQLQEEEGMSVLFITHDMGVVAEVADRTIVMFRGDVVETGTTDDI 256

Query: 246 FSSPQHHYTQMLINAEPS-------GLPAHNPV---------------------GAPLLE 277
           F   QH YT+ L++A P         LPA  P+                       P+L 
Sbjct: 257 FHRGQHPYTRALLSAVPKLGSMRSRLLPARFPIIDIKTGESPPVVETKDTVSGGKTPILS 316

Query: 278 VDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLIS 337
           V DL   F I+ G   R    V AV+ V+F L +G+TL +VGESG GKST G +I RLI 
Sbjct: 317 VKDLTTRFDIRSGLFGRKSGAVHAVEKVSFDLAEGETLSLVGESGCGKSTTGRSITRLIE 376

Query: 338 -SQGGIRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGT 396
            + G +   G  +  L++  +R +RR +Q+VFQDPF SL PRM V   + E    HR+G 
Sbjct: 377 PTSGNVTLDGYEVLKLDRTTLRTMRRSVQMVFQDPFASLDPRMSVGTAIMEPFMEHRLGQ 436

Query: 397 AQEQEAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALD 456
             +        LE+VGL P    R+PHEFSGGQRQRIAIAR+L+L P +I+ DE  SALD
Sbjct: 437 KAQAREKAADLLEKVGLSPDMMKRFPHEFSGGQRQRIAIARSLMLDPKVIVADEAVSALD 496

Query: 457 RTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAP 516
            +++ QV  LL +LQQ  NL +LFISHD+AVV+ +SH++ V+  G +VE G   A+F  P
Sbjct: 497 VSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAVFDNP 556

Query: 517 QHPYTRQLLEA 527
           QHPYT++L+ A
Sbjct: 557 QHPYTKKLMSA 567



 Score =  183 bits (464), Expect = 2e-50
 Identities = 108/274 (39%), Positives = 167/274 (60%), Gaps = 17/274 (6%)

Query: 6   LIEVRDLAVEF-----VTGDQVNRV--VDGVSFDIRKGETLALVGESGSGKSVTAHSILR 58
           ++ V+DL   F     + G +   V  V+ VSFD+ +GETL+LVGESG GKS T  SI R
Sbjct: 314 ILSVKDLTTRFDIRSGLFGRKSGAVHAVEKVSFDLAEGETLSLVGESGCGKSTTGRSITR 373

Query: 59  LLPYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINE 118
           L+        SG++  +G ++L+    TL+ +R + + M+FQ+P  SL+P   +   I E
Sbjct: 374 LI-----EPTSGNVTLDGYEVLKLDRTTLRTMRRS-VQMVFQDPFASLDPRMSVGTAIME 427

Query: 119 ILLLHKGLTGKEATARTLELLDMVGI-PEPRKRLKALPHELSGGQRQRVMIAMALANEPE 177
             + H+     +A  +  +LL+ VG+ P+  KR    PHE SGGQRQR+ IA +L  +P+
Sbjct: 428 PFMEHRLGQKAQAREKAADLLEKVGLSPDMMKRF---PHEFSGGQRQRIAIARSLMLDPK 484

Query: 178 LLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIV 237
           +++ADE  +ALDV+++ ++  LL +LQ  + +A L ISHD+ +V R++HRV VM  G+IV
Sbjct: 485 VIVADEAVSALDVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIV 544

Query: 238 EQAECATLFSSPQHHYTQMLINAEPSGLPAHNPV 271
           E    A +F +PQH YT+ L++A P   PA   +
Sbjct: 545 EIGPRAAVFDNPQHPYTKKLMSAVPVPDPARRQI 578