Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 544 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  403 bits (1036), Expect = e-117
 Identities = 231/531 (43%), Positives = 338/531 (63%), Gaps = 13/531 (2%)

Query: 1   MSEQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLL 60
           M++  L+ VR L++E V G   +RVV  VSFDI  GE   +VGESGSGK++   +++ LL
Sbjct: 1   MTDNTLLTVRGLSLE-VAGSG-HRVVKDVSFDIAPGEIFGIVGESGSGKTLATRALISLL 58

Query: 61  PYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEIL 120
           P P      GS+ Y+G+D++    + L+R+RG  I ++FQEPMTSLNP   I +Q+ E L
Sbjct: 59  P-PAIAVTGGSVIYKGQDVMSLPARELRRLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGL 117

Query: 121 LLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLI 180
           +LH  L+ +E   + LE+L  VGI +P   L A PHE SGG RQR+M+A  +  +P LLI
Sbjct: 118 ILHTKLSPEERREKILEMLRRVGIRDPEGALAAYPHEFSGGMRQRIMLASVMLLKPALLI 177

Query: 181 ADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA 240
           ADEPTTALD  +Q  ++EL+ EL    G A+LLISHDL +V R   R+ VM++G IVEQ 
Sbjct: 178 ADEPTTALDAVIQRDVMELMVELTRAEGTAVLLISHDLPMVARYTSRIVVMEKGAIVEQG 237

Query: 241 ECATLFSSPQHHYTQMLINAEP-SGLP-AHNPVGAPLLEVDDLKVWFPIKKGFLQRTVDH 298
               L  +P+H YT+ L+++ P  G P + +   AP++    + V +  +K  L++    
Sbjct: 238 RTEDLLDAPRHPYTKKLLSSLPFRGEPRSIDTSKAPMVSARGIVVDYAGRKSLLKKAKPK 297

Query: 299 VKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLI-SSQGGIRFHGQNLEGLNQKAV 357
            +A+ GV+  + +G+ + +VG SGSGK+TLG  I  L+  S+G IRF G+       +  
Sbjct: 298 -RALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVKESEGHIRFQGRE----RNEDW 352

Query: 358 RPLRREMQVVFQDPFGSLSPRMCVADIVGEGLR-IHRIGTAQEQEAAIIAALEEVGLDPR 416
              R   Q+VFQDP+ SL PRM +  +V E LR +  +  A +++ A +  LEEVGL   
Sbjct: 353 NDYRLNCQMVFQDPYSSLDPRMTIQALVEEALRLVPGLDQAAKRKRA-LETLEEVGLGVD 411

Query: 417 TRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNL 476
              RYPHE SGGQRQR+AIARA+  +P  ++ DEP SALD TV+ QV++L  +LQ++Y  
Sbjct: 412 YAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGF 471

Query: 477 TYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527
           + LFISHDL VV+ ++ +++V++ G ++E+GD   IF +P+  YTR+LL A
Sbjct: 472 SCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPREAYTRRLLSA 522



 Score =  176 bits (445), Expect = 3e-48
 Identities = 106/268 (39%), Positives = 156/268 (58%), Gaps = 18/268 (6%)

Query: 2   SEQNLIEVRDLAVEFVTGDQV------NRVVDGVSFDIRKGETLALVGESGSGKSVTAHS 55
           S+  ++  R + V++     +       R + GVS DI +GE +ALVG SGSGK+    +
Sbjct: 270 SKAPMVSARGIVVDYAGRKSLLKKAKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRT 329

Query: 56  ILRLLPYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQ 115
           I  L+     +   G IR++G++  +  +    R+      M+FQ+P +SL+P   I+  
Sbjct: 330 IAGLV-----KESEGHIRFQGRE--RNEDWNDYRLN---CQMVFQDPYSSLDPRMTIQAL 379

Query: 116 INEILLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANE 175
           + E L L  GL       R LE L+ VG+          PHELSGGQRQRV IA A+A  
Sbjct: 380 VEEALRLVPGLDQAAKRKRALETLEEVGLGVDYAG--RYPHELSGGQRQRVAIARAIARR 437

Query: 176 PELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQ 235
           P  LIADEP +ALDVTV+ ++L+L  +LQ R G + L ISHDL +V ++A RV VMQ G+
Sbjct: 438 PRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGR 497

Query: 236 IVEQAECATLFSSPQHHYTQMLINAEPS 263
           I+E+ +  T+F SP+  YT+ L++A P+
Sbjct: 498 IIEEGDRDTIFDSPREAYTRRLLSAIPA 525