Pairwise Alignments

Query, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 548 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  427 bits (1099), Expect = e-124
 Identities = 234/526 (44%), Positives = 340/526 (64%), Gaps = 7/526 (1%)

Query: 6   LIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLA 65
           ++ VR+L V+   G + +  V  +SFD+  GE L ++GESGSGKSVTA +I+ LL  P+ 
Sbjct: 11  VLSVRNLTVDLPRGMERSHAVKDISFDLHAGEILCIIGESGSGKSVTASTIMGLLS-PVI 69

Query: 66  RHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKG 125
              SG I+++G D+L   E+ ++ +RG  +++IFQ+P+++LNPL  +  Q+ E+L  H  
Sbjct: 70  TVSSGEIQFKGMDILAAKEEKIRPLRGQAVSIIFQDPLSALNPLMTVGDQVAEVLEAHGV 129

Query: 126 LTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPT 185
            T +   A+ LELL+ VG+P+P       P  LSGGQRQRVMIAMALA +P++LIADEPT
Sbjct: 130 GTRETRNAKVLELLEEVGLPDPLLMRLQYPFRLSGGQRQRVMIAMALALDPDVLIADEPT 189

Query: 186 TALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECATL 245
           TALDVT Q +ILEL++++Q R  M+++ I+HD  +V  IA RV VM++G +VEQ     +
Sbjct: 190 TALDVTTQAQILELIRKIQKRKNMSVMFITHDFGVVAEIADRVVVMEKGYLVEQGRADQV 249

Query: 246 FSSPQHHYTQMLINAEPSGLPAHNPVGAP---LLEVDDLKVWFPIKKGFLQRTVDHVKAV 302
             +P H YTQ L+ A P        +      +LEV++L+  +     F  R    VKAV
Sbjct: 250 LINPVHPYTQRLVAAVPRMRSVERSIDEEVPVVLEVENLEKEYRSSGSFF-RKARTVKAV 308

Query: 303 DGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGG-IRFHGQNLEGLNQKAVRPLR 361
           + V+F L +GQTLG+VGESGSGKS+LG  +L+L+   GG IRF G+++  +++ A R LR
Sbjct: 309 NNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKLLDPDGGAIRFDGRDIATMDESAFRALR 368

Query: 362 REMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAAIIAALEEVGLDPRTRHRY 421
             +Q++FQDPF SL+PR  +  I+  G   H +    E     +  L+ VGLD +   R+
Sbjct: 369 PYIQMIFQDPFASLNPRHTIGKILTVGPLAHGM-ALHEARTKALGILKLVGLDEQAYDRF 427

Query: 422 PHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFI 481
           PHEFSGGQRQRI IARAL+  P +++ DE  SALD ++Q QV+ELL  +Q++  +  +FI
Sbjct: 428 PHEFSGGQRQRIGIARALMFDPVVLVADEAVSALDVSIQAQVLELLARVQREMKVAMIFI 487

Query: 482 SHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527
           +HDL V   +   ++V+  G VVEQG    IF AP HPYT++L+ A
Sbjct: 488 THDLRVASQICDDVLVMHKGTVVEQGPPTKIFRAPTHPYTQKLVAA 533



 Score =  181 bits (460), Expect = 5e-50
 Identities = 112/275 (40%), Positives = 159/275 (57%), Gaps = 21/275 (7%)

Query: 6   LIEVRDLAVEFVTGDQVNR------VVDGVSFDIRKGETLALVGESGSGKSVTAHSILRL 59
           ++EV +L  E+ +     R       V+ VSF +RKG+TL +VGESGSGKS     +L+L
Sbjct: 282 VLEVENLEKEYRSSGSFFRKARTVKAVNNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKL 341

Query: 60  LPYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEI 119
           L         G+IR++G+D+    E   + +R   I MIFQ+P  SLNP H I K +   
Sbjct: 342 LD-----PDGGAIRFDGRDIATMDESAFRALRPY-IQMIFQDPFASLNPRHTIGKILTVG 395

Query: 120 LLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELL 179
            L H G+   EA  + L +L +VG+ E  +     PHE SGGQRQR+ IA AL  +P +L
Sbjct: 396 PLAH-GMALHEARTKALGILKLVGLDE--QAYDRFPHEFSGGQRQRIGIARALMFDPVVL 452

Query: 180 IADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQ 239
           +ADE  +ALDV++Q ++LELL  +Q  M +A++ I+HDL +  +I   V VM +G +VEQ
Sbjct: 453 VADEAVSALDVSIQAQVLELLARVQREMKVAMIFITHDLRVASQICDDVLVMHKGTVVEQ 512

Query: 240 AECATLFSSPQHHYTQMLINA------EPSGLPAH 268
                +F +P H YTQ L+ A      EPS   AH
Sbjct: 513 GPPTKIFRAPTHPYTQKLVAAIPGADWEPSAEVAH 547