Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 346 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  129 bits (325), Expect = 8e-35
 Identities = 77/218 (35%), Positives = 124/218 (56%), Gaps = 4/218 (1%)

Query: 123 LGTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVDLAGQRFLEI 182
           LGTD  GRDVLA +++G R+S+L     T+A  + G++ GA  G++GG VD    + +EI
Sbjct: 126 LGTDALGRDVLAGLVHGARVSLLVGACATLAGLLAGILVGATAGYFGGVVDDVLSKLIEI 185

Query: 183 WSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALG 242
           +  +P   LLI+L +  QP+   +   +   SW  +  +VRA+F   +  ++V AARALG
Sbjct: 186 FQTVPGFILLIVLVAIAQPSVPAIALAIAAVSWPQVARLVRAQFRAIKEKDFVAAARALG 245

Query: 243 MRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKS 302
             +G I++R ILPNA+   +      +  AI   +AL F+G G P    S G ++  G+ 
Sbjct: 246 FGHGRIIFREILPNALPPVIVLASVTVATAILMESALSFMGLGDP-NVVSWGSMIGTGRD 304

Query: 303 NLQAPWLGISAFAVLALMLSLLV--FIGESARDAFDPR 338
            L+  W  +SA   +A++L++L    IG+   +A +PR
Sbjct: 305 LLRTAWY-LSAVPGVAIVLTVLSLNLIGDGLNEALNPR 341