Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 271 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  129 bits (323), Expect = 1e-34
 Identities = 82/246 (33%), Positives = 121/246 (49%), Gaps = 6/246 (2%)

Query: 94  LWAPIPFSYQSINYDLRVPAPAPPSADNWLGTDDQGRDVLARVIYGFRISVLFALTLTVA 153
           +W P    Y  +  DLR     PPS  +WLGTD+ GRDV +R + G   S L AL     
Sbjct: 27  VWTP----YNPLAIDLRSKLQ-PPSMAHWLGTDEFGRDVASRAMQGAATSCLVALLTVTL 81

Query: 154 SSIVGVIAGALQGFYGGWVDLAGQRFLEIWSGLPVLYLLIILASFVQPNFWWLLGIMLLF 213
           ++ +G++ G + GF  GW D     F +     P L L + +   V  N W ++  + + 
Sbjct: 82  ATAIGLVVGVVAGFVRGWTDRVLMAFNDTLLAFPGLLLALGVMVIVGANKWGIVLALSMA 141

Query: 214 SWMSLVDVVRAEFLRGRNLEYVRAARALGMRNGAIMYRHILPNAMISTMTFMPFILTGAI 273
              S+V VVR   L  R  EYV A+R +G      M+RHILPN +         +    +
Sbjct: 142 YAPSVVRVVRGTVLSLREREYVEASRMIGNSELYTMWRHILPNCVAPVAVLATSMFGWVL 201

Query: 274 GTLTALDFLGFGLPAGSPSLGELVAQGKSNL-QAPWLGISAFAVLALMLSLLVFIGESAR 332
            + +AL FLG G+P  +P+ G ++A  +  +  A WL +     +AL L  +  +GES R
Sbjct: 202 LSESALSFLGLGVPPPAPTWGNMLASARPYMASAVWLCVVPGLCIALTLLGINLLGESLR 261

Query: 333 DAFDPR 338
           D  DPR
Sbjct: 262 DRLDPR 267