Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 326 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  126 bits (317), Expect = 7e-34
 Identities = 78/244 (31%), Positives = 131/244 (53%), Gaps = 6/244 (2%)

Query: 99  PFSYQSINYDLRVPAPAPPSADNW--LGTDDQGRDVLARVIYGFRISVLFALTLTVASSI 156
           P  Y     D+  P    P  D    LG+D  GRDV+A + +G R+S+   +   V S +
Sbjct: 81  PLLYPGDPLDMVAPPLLWPGQDAAYPLGSDSLGRDVIAGIAHGARVSLAVGVVAAVLSLV 140

Query: 157 VGVIAGALQGFYGGWVDLAGQRFLEIWSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWM 216
           +GV+ GA  G++GG +D    R  E++  +P    +I++ +  QP+   ++  + L SW 
Sbjct: 141 IGVLVGATAGYFGGRIDDVLVRITELFQTMPSFLFVIVVVAIGQPSVPVIVCAIGLASWP 200

Query: 217 SLVDVVRAEFLRGRNLEYVRAARALGMRNGAIMYRHILPNAMISTMTFMPFILTGAIGTL 276
            +  +VRAEF   R  E+V AAR+ G  +  I+++ +LPNA+   +     ++  AI   
Sbjct: 201 VIARLVRAEFRALRETEFVLAARSQGFSHARIIFQEMLPNALPPVIVTTSVLVASAILIE 260

Query: 277 TALDFLGFGLPAGSPSLGELVAQGKSNLQAPWLGISAFAVLALMLSLLV--FIGESARDA 334
           +AL FLG G P  + S G ++ QG+  L+  W  ++A    A++L++L    +G+   DA
Sbjct: 261 SALSFLGMGDP-NAVSWGSMIGQGRELLRTAWY-LTALPGAAIVLTVLALNLVGDGLNDA 318

Query: 335 FDPR 338
           F+PR
Sbjct: 319 FNPR 322