Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 303 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  128 bits (321), Expect = 2e-34
 Identities = 76/243 (31%), Positives = 126/243 (51%), Gaps = 5/243 (2%)

Query: 99  PFSYQSINYDLRVPAPAPP-SADNWLGTDDQGRDVLARVIYGFRISVLFALTLTVASSIV 157
           P+ Y +  ++++     PP S D WLG+D  GRDVL  +IYG R ++L      + S ++
Sbjct: 59  PWVYPADPFEIKAAPLTPPFSEDAWLGSDYLGRDVLTALIYGGRATLLVGAVAALLSVLI 118

Query: 158 GVIAGALQGFYGGWVDLAGQRFLEIWSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMS 217
           G+  GA  G+YGG +D A  +  E +  LP L   +++ +   P    +   + + SW  
Sbjct: 119 GITLGAFAGYYGGKIDAALMKLTEFFQVLPALLFAMVVVTLFSPTLVTVTLAIGIVSWTG 178

Query: 218 LVDVVRAEFLRGRNLEYVRAARALGMRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLT 277
              + RAEF++ R LE+VRA RA+G  +  I+++ ILPNA+   +      +  AI    
Sbjct: 179 TARLTRAEFMKYRGLEFVRAERAIGAGDARIIWKVILPNALPPLVVSATLAIGAAILFEA 238

Query: 278 ALDFLGFGLPAGSPSLGELVAQGKSNLQAPWLGISAFAVLALMLSLLV--FIGESARDAF 335
            L FLG G P    S G ++   +  + + W  + AF   A+ +++L    IG+   DA 
Sbjct: 239 GLSFLGLGDP-NQMSWGLMIGSSRQYVLSCWWAV-AFPGAAIFITVLAVSLIGDGLNDAL 296

Query: 336 DPR 338
           +P+
Sbjct: 297 NPK 299