Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 303 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  139 bits (349), Expect = 1e-37
 Identities = 93/254 (36%), Positives = 130/254 (51%), Gaps = 14/254 (5%)

Query: 99  PFSYQSINY-DLRVPAP--APPSADNWLGTDDQGRDVLARVIYGFRISVLFALTLTVASS 155
           PF   ++   D R+P    A  S+   LGTDDQGRD+L+ VIYG RIS++  L   V S 
Sbjct: 48  PFDLAALELGDARLPPAWSAEGSSKYLLGTDDQGRDILSAVIYGARISLIVGLVSVVLSV 107

Query: 156 IVGVIAGALQGFYGGWVDLAGQRFLEIWSGLPVLYLLIILASFVQP---------NFWWL 206
           +VGV+ G L GF+GGW+D    R  ++    P + + +++A   +           F  L
Sbjct: 108 VVGVVLGLLAGFFGGWLDSFLMRVCDVMLSFPPILVALLIAGVGRALFPGAHESLAFGVL 167

Query: 207 LGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALGMRNGAIMYRHILPNAMISTMTFMP 266
           +  + L  W+     VR   L  RN EYV+AAR  G+    IM RH+LPN +        
Sbjct: 168 IVSISLTGWVQYARTVRGSTLVERNKEYVQAARVTGVAPMRIMLRHVLPNVLGPVTVLAT 227

Query: 267 FILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKSNLQAPWLGISAFAVLALMLSLLV- 325
             +  AI T   L FLG G+P  SPSLG L++ G   L +    I+ F  L L+L  L  
Sbjct: 228 IQVATAIITEATLSFLGVGVPPTSPSLGTLISIGNQYLFSGEWWITVFPGLMLVLIALSV 287

Query: 326 -FIGESARDAFDPR 338
             +G+  RDA +PR
Sbjct: 288 NLLGDWLRDALNPR 301