Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 346 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  380 bits (976), Expect = e-110
 Identities = 182/337 (54%), Positives = 252/337 (74%), Gaps = 1/337 (0%)

Query: 3   LSPLNRRRFERFKANRRGWWSLWLFLILFGLSLGAELIANDKPIAVRYDGQWYFPAFKRY 62
           +SP  RR + RFK NR G+WSL +F ++  LSL AE+++ DKP+ +RY+G+ YFP  + Y
Sbjct: 8   ISP-GRRAWLRFKRNRLGFWSLVIFTVMVVLSLFAEVLSTDKPLVLRYEGRTYFPVLRDY 66

Query: 63  PETTFGGEFPLEANYKSPYIRELLAKKDSFVLWAPIPFSYQSINYDLRVPAPAPPSADNW 122
            E TFGG+F   A+Y  PYIR+ + + D++ ++AP P+  +++NY  + P+PA P+ADN 
Sbjct: 67  SEKTFGGDFETPADYLDPYIRDRITQGDNWAIYAPNPYGPKTLNYFAKAPSPAAPTADNI 126

Query: 123 LGTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVDLAGQRFLEI 182
            GTDD+GRD+LA++IYGFR+SVLF L LT   +++GV AGA+QG++ G VDLA QRF+EI
Sbjct: 127 FGTDDRGRDLLAQLIYGFRVSVLFGLALTAIGTVLGVAAGAVQGYFAGKVDLAFQRFIEI 186

Query: 183 WSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALG 242
           WS +P LYLLII ++   P+   LL ++ LF WM L D VRAEFLR R ++YVRAARALG
Sbjct: 187 WSSMPELYLLIIFSAIFAPSVALLLILLSLFGWMGLADYVRAEFLRNRQMDYVRAARALG 246

Query: 243 MRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKS 302
           + N  IM+RHILPN+M+  +TF+PF ++ AI  LT+LDFLG G+P G+PSLGEL++QGK+
Sbjct: 247 VSNLQIMWRHILPNSMVPVVTFLPFRMSAAILALTSLDFLGLGVPPGTPSLGELLSQGKA 306

Query: 303 NLQAPWLGISAFAVLALMLSLLVFIGESARDAFDPRK 339
           N+ A W+ IS F VL + L LL F+G++ RDA DPRK
Sbjct: 307 NIDAWWISISTFGVLVVTLMLLTFMGDALRDALDPRK 343