Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 350 a.a., Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  382 bits (982), Expect = e-111
 Identities = 183/331 (55%), Positives = 246/331 (74%)

Query: 9   RRFERFKANRRGWWSLWLFLILFGLSLGAELIANDKPIAVRYDGQWYFPAFKRYPETTFG 68
           R + RFK NR G+WSL +F +L   SL AEL++ND+P+ VRY+G+ YFP  K Y ET FG
Sbjct: 17  RAWRRFKRNRLGYWSLLIFSVLVVGSLFAELLSNDRPLIVRYEGRTYFPLVKDYAETVFG 76

Query: 69  GEFPLEANYKSPYIRELLAKKDSFVLWAPIPFSYQSINYDLRVPAPAPPSADNWLGTDDQ 128
           G+F   A+Y  P+IRE + + D++ L+AP P+  Q+INY  + P P+ P+ DNWLGTDD+
Sbjct: 77  GDFETPADYLDPFIREQITRGDNWALYAPNPYGAQTINYFAKSPNPSAPTWDNWLGTDDR 136

Query: 129 GRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVDLAGQRFLEIWSGLPV 188
           GRD+LA++IYGFR+SVLFAL LT    ++GVI GA+QGF+GG  DLA QRF+EIW  +P 
Sbjct: 137 GRDLLAQLIYGFRVSVLFALALTAIGVVLGVITGAIQGFFGGKTDLAFQRFIEIWGSMPE 196

Query: 189 LYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALGMRNGAI 248
           LYLLII ++   P+   LL ++ LF WMSL D VRAEFLR R L+YVRAARA+G+ N  I
Sbjct: 197 LYLLIIFSAVFSPSVGLLLILLSLFGWMSLSDYVRAEFLRNRQLDYVRAARAMGLSNAQI 256

Query: 249 MYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKSNLQAPW 308
           ++RH+LPN++   +TF+PF ++ AI  LT+LDFLG G+P G+PSLGEL+ QGK ++ A W
Sbjct: 257 IWRHVLPNSLTPVVTFLPFRMSAAILALTSLDFLGLGVPPGTPSLGELLNQGKGSIDAWW 316

Query: 309 LGISAFAVLALMLSLLVFIGESARDAFDPRK 339
           + +S FAVL + L LL F+G++ RDA DPRK
Sbjct: 317 IALSTFAVLVVTLLLLTFMGDALRDALDPRK 347