Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 341 a.a., Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  457 bits (1175), Expect = e-133
 Identities = 214/337 (63%), Positives = 272/337 (80%), Gaps = 1/337 (0%)

Query: 3   LSPLNRRRFERFKANRRGWWSLWLFLILFGLSLGAELIANDKPIAVRYDGQWYFPAFKRY 62
           LSP+N+ R+ RF+ NRRG+WSLW+FL++F LSL AELIANDKP+ VRY+GQWYFP  K Y
Sbjct: 4   LSPVNQARWARFRHNRRGYWSLWIFLVVFSLSLCAELIANDKPLLVRYEGQWYFPLVKNY 63

Query: 63  PETTFGGEFPLEANYKSPYIRELLAKKDSFVLWAPIPFSYQSINYDLRVPAPAPPSADNW 122
            E  FGG     A+Y+ P+++  L  +  +VLWAP+ FS  +IN+    P P+PPSA NW
Sbjct: 64  SERDFGGPLATTADYQDPWLQRQLENR-GWVLWAPVRFSANTINFATTQPFPSPPSAKNW 122

Query: 123 LGTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVDLAGQRFLEI 182
           LGTD  G DV AR++YG RIS+LF L LT+ SS++GV+AGALQG+YGG VDL GQR +E+
Sbjct: 123 LGTDANGGDVFARILYGTRISILFGLMLTICSSVMGVLAGALQGYYGGKVDLWGQRLIEV 182

Query: 183 WSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALG 242
           WSG+P L+L+I+L+S VQPNFWWLL I +LF WMSLV VVRAEFLR RN +Y+RAA+ALG
Sbjct: 183 WSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQALG 242

Query: 243 MRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKS 302
           + +  I+ RH+LPNAM++T+TF+PFIL  +I TLT+LDFLGFGLP GSPSLGEL+ QGK+
Sbjct: 243 VSDRDIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQGKN 302

Query: 303 NLQAPWLGISAFAVLALMLSLLVFIGESARDAFDPRK 339
           NLQAPWLGI+AF  +A++LSLL+FIGE+ RDAFDP K
Sbjct: 303 NLQAPWLGIAAFLSVAILLSLLIFIGEAVRDAFDPAK 339