Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 341 a.a., microcin C ABC transporter permease from Escherichia coli BL21

 Score =  465 bits (1196), Expect = e-136
 Identities = 218/337 (64%), Positives = 277/337 (82%), Gaps = 1/337 (0%)

Query: 3   LSPLNRRRFERFKANRRGWWSLWLFLILFGLSLGAELIANDKPIAVRYDGQWYFPAFKRY 62
           LSP+N+ R+ RF+ NRRG+WSLW+FL+LFGLSL +ELIANDKP+ VRYDG WYFP  K Y
Sbjct: 4   LSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIANDKPLLVRYDGSWYFPLLKNY 63

Query: 63  PETTFGGEFPLEANYKSPYIRELLAKKDSFVLWAPIPFSYQSINYDLRVPAPAPPSADNW 122
            E+ FGG    +A+Y+ P++++ L + + +VLWAPI F   SIN+    P P+PPS  NW
Sbjct: 64  SESDFGGPLASQADYQDPWLKQRL-ENNGWVLWAPIRFGATSINFATDKPFPSPPSRQNW 122

Query: 123 LGTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVDLAGQRFLEI 182
           LGTD  G DVLAR++YG RISVLF L LT+ SS++GV+AGALQG+YGG VDL GQRF+E+
Sbjct: 123 LGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRFIEV 182

Query: 183 WSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALG 242
           WSG+P L+L+I+L+S VQPNFWWLL I +LF WMSLV VVRAEFLR RN +Y+RAA+ALG
Sbjct: 183 WSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQALG 242

Query: 243 MRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKS 302
           + + +I+ RH+LPNAM++T+TF+PFIL  +I TLT+LDFLGFGLP GSPSLGEL+ QGK+
Sbjct: 243 VSDRSIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQGKN 302

Query: 303 NLQAPWLGISAFAVLALMLSLLVFIGESARDAFDPRK 339
           NLQAPWLGI+AF  +A++LSLL+FIGE+ RDAFDP K
Sbjct: 303 NLQAPWLGITAFLSVAILLSLLIFIGEAVRDAFDPNK 339