Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  130 bits (328), Expect = 3e-35
 Identities = 74/249 (29%), Positives = 131/249 (52%), Gaps = 4/249 (1%)

Query: 94  LWAPIPFSYQSINYDLRVPAPAPPSADNWL-GTDDQGRDVLARVIYGFRISVLFALTLTV 152
           L+A +   +  +  DLR     PP    +L GTDDQGRD+L+R+I+G R+++   L + +
Sbjct: 60  LFADVLAPHNPVQGDLRNARLLPPGTAGYLLGTDDQGRDILSRLIHGSRLTLFVVLLVAI 119

Query: 153 ASSIVGVIAGALQGFYGGWVDLAGQRFLEIWSGLPVLYLLIILASFVQPNFWWLLGIMLL 212
            ++ +G+I G + G+ GGWVD    R  +I+   P L L + L + + P     +  + +
Sbjct: 120 IAAPIGLIVGTVSGYAGGWVDAILMRITDIFLAFPKLVLALALVAALGPGIENAVLAIAV 179

Query: 213 FSWMSLVDVVRAEFLRGRNLEYVRAARALGMRNGAIMYRHILPNAMISTMTFMPFILTGA 272
            SW     + RAE +  RN +++ A + +G     I+ +H++P  + S +  +   + G 
Sbjct: 180 TSWPPYARIARAETMTFRNSDFIAAVKLMGASPFRIVLKHVMPLCLSSLIVRVTLDMAGI 239

Query: 273 IGTLTALDFLGFGLPAGSPSLGELVAQGKSNLQAPWLGISAFAVLALMLSLLVF--IGES 330
           I T   L FLG G     P  G ++A G+  +   W  ++A   +A+++  L F  +G+ 
Sbjct: 240 ILTAAGLGFLGLGAQPPLPEWGAMIASGRRFILDQW-WVAAMPGIAILIVSLGFNLLGDG 298

Query: 331 ARDAFDPRK 339
            RDA DP++
Sbjct: 299 LRDALDPKE 307