Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 338 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  142 bits (358), Expect = 1e-38
 Identities = 79/218 (36%), Positives = 126/218 (57%), Gaps = 1/218 (0%)

Query: 122 WLGTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVDLAGQRFLE 181
           + GTD  GRD+LARV+ G +IS+   +  ++ S  +GV+ GA  G+ GG VD    RF+E
Sbjct: 119 FFGTDSNGRDMLARVMLGGQISIAVGILASLVSLGIGVLYGATAGYIGGRVDNVMMRFVE 178

Query: 182 IWSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARAL 241
           I   LP ++L+++L  F   +F  +  ++    W+ +  +VR + L  +  E+V AA+AL
Sbjct: 179 ILYSLPFVFLVVVLVVFFGRSFILIFLVIGAVEWLDMARIVRGQTLALKRREFVGAAQAL 238

Query: 242 GMRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGK 301
           G+ +  I+ RHI+PN +   + F+  ++   I   + L FLG G+ A   S G L+++G 
Sbjct: 239 GLSDWQIIRRHIIPNTIGPVVVFVTVVVPKVILLESFLSFLGLGVQAPLTSWGALISEGA 298

Query: 302 SNLQ-APWLGISAFAVLALMLSLLVFIGESARDAFDPR 338
           +N+Q APWL I       L L  L F+G+  RDA DP+
Sbjct: 299 NNIQSAPWLLIFPAIFFVLTLFSLNFVGDGLRDALDPK 336