Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 331 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  124 bits (312), Expect = 3e-33
 Identities = 72/218 (33%), Positives = 120/218 (55%), Gaps = 4/218 (1%)

Query: 123 LGTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVDLAGQRFLEI 182
           LGTD  GRDVLA +++G RIS+   +  T+    +G+  GA  G++GG +D    + +EI
Sbjct: 110 LGTDSMGRDVLAGIVHGARISLTVGVVATLIGLTIGISIGAFAGYFGGVIDDILVKLIEI 169

Query: 183 WSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALG 242
           +  LP   LL++L +  QP+   +   + + +W  +  + RAEF   R  +YV AAR+LG
Sbjct: 170 FQTLPNFVLLVVLVAIAQPSVTTVTSAIGIITWPLVARLTRAEFRAIREKDYVLAARSLG 229

Query: 243 MRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKS 302
             +  I+++ ILPNA+   +     ++ GAI    AL F+G G P    S G ++  G+ 
Sbjct: 230 YGHARIVFQEILPNALPPIIVTSSVMVAGAILMEAALSFMGLGDP-NRVSWGSMIGSGRD 288

Query: 303 NLQAPWLGISAFAVLALMLSL--LVFIGESARDAFDPR 338
            ++  W  ++A   LA++ ++  L  I +   DA +PR
Sbjct: 289 VIRTAWY-LTALPGLAIVFTVISLNLISDGLNDALNPR 325