Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 296 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  144 bits (363), Expect = 3e-39
 Identities = 83/243 (34%), Positives = 130/243 (53%), Gaps = 1/243 (0%)

Query: 97  PIPFSYQSINYDLRVPAPAPPSADNWLGTDDQGRDVLARVIYGFRISVLFALTLTVASSI 156
           P    Y  +  DLR     P +  +  GTD  GRD+ AR+    RIS+L      V S++
Sbjct: 50  PYLLPYDELFIDLRARFAPPLTGYHIFGTDPLGRDIAARLFNAGRISLLVGFFAMVLSTL 109

Query: 157 VGVIAGALQGFYGGWVDLAGQRFLEIWSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWM 216
           +G + G + G+YGG +     RF++ +   P ++LL+ LA+FV+P+ + +  I+ + SWM
Sbjct: 110 IGTVIGVVAGYYGGRIGAILMRFVDAFLSFPSIFLLLALAAFVKPSPFMITLIIAVTSWM 169

Query: 217 SLVDVVRAEFLRGRNLEYVRAARALGMRNGAIMYRHILPNAMISTMTFMPFILTGAIGTL 276
            +  +V AE    R  ++V AAR LG+ NG IM+R +LPNA+   +      +  AI   
Sbjct: 170 EIARLVEAEVRSLRERDFVMAARMLGLPNGWIMFRELLPNAIGPIIVAATLTVARAILLE 229

Query: 277 TALDFLGFGLPAGSPSLGELVAQGKSNL-QAPWLGISAFAVLALMLSLLVFIGESARDAF 335
             + FLG+G+    PS G ++   +  L +APWL I     + L ++   FIG+  RDA 
Sbjct: 230 AYISFLGYGIQPPLPSWGNMLNGAQQYLDKAPWLAIIPGVAITLAVTSFNFIGDGLRDAL 289

Query: 336 DPR 338
           D R
Sbjct: 290 DAR 292