Pairwise Alignments

Query, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 381 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

 Score =  429 bits (1104), Expect = e-125
 Identities = 212/360 (58%), Positives = 273/360 (75%), Gaps = 26/360 (7%)

Query: 4   SPLNRRRFERFKANRRGWWSLWLFLILFGLSLGAELIANDKPIAVRYDGQWYFPAFKRYP 63
           SP  +RR++ FKANRRG+WS WLFLILF LSL AE IANDKPI   Y G+   P    YP
Sbjct: 21  SPTTKRRWQNFKANRRGYWSFWLFLILFFLSLIAEFIANDKPILASYKGEILVPVMVDYP 80

Query: 64  ETTFGGEFPLEANYKSPYIRELLAKKDSFVLWAPIPFSYQSINYDLRVPAPAPP------ 117
           E  FGG F  + +YKS +I++ +   + +++W PI +SYQ++N ++   AP  P      
Sbjct: 81  EEKFGG-FLAQTDYKSSFIQDEI-NANGWMIWPPIRYSYQTVNSNIPHSAPTAPFWLMDE 138

Query: 118 ----------SAD--------NWLGTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGV 159
                     +AD        NWLGTD+Q RDV AR+IYGFRISVLF LTLT+AS++VGV
Sbjct: 139 KERCSAYPQGNADPGCTLGNLNWLGTDNQARDVTARMIYGFRISVLFGLTLTIASALVGV 198

Query: 160 IAGALQGFYGGWVDLAGQRFLEIWSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLV 219
            AGA+QG++GGW DL  QRF+EIWS +PVLY+L+I+A+ + P F+ LLGIMLLFSW+  V
Sbjct: 199 TAGAIQGYFGGWTDLLLQRFIEIWSSMPVLYILLIIAAILPPGFFVLLGIMLLFSWVGFV 258

Query: 220 DVVRAEFLRGRNLEYVRAARALGMRNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTAL 279
            +VRAEFLR RN EYVRAARALG+ N  IM+RH+LPNAM++T+TF+PFIL+G+I TLT+L
Sbjct: 259 GIVRAEFLRARNFEYVRAARALGVGNWTIMFRHLLPNAMVATLTFLPFILSGSITTLTSL 318

Query: 280 DFLGFGLPAGSPSLGELVAQGKSNLQAPWLGISAFAVLALMLSLLVFIGESARDAFDPRK 339
           DFLGFG+P GSPSLGE++AQGK+NLQAPWLG++AF  +++MLSLL+F+GE+ RDAFDPRK
Sbjct: 319 DFLGFGMPPGSPSLGEMIAQGKNNLQAPWLGLTAFFTMSIMLSLLIFVGEAVRDAFDPRK 378