Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 69.7 bits (169), Expect = 3e-16
 Identities = 95/454 (20%), Positives = 175/454 (38%), Gaps = 85/454 (18%)

Query: 106 VAGKIEKAPDNSWVRFYLRPEARFHDGHPMR------ADDVVFTFNALIKDGAPLYRQYY 159
           +A K + +PD     F+LR   +FH     +      ADDV+FTFN ++    P  + Y 
Sbjct: 76  LATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTFNRMLDPDHPFRKAYP 135

Query: 160 AD------------VAEVVAEEPLKVLFKFKHKNNRELPLILGQLPVLPKHWYENREFNR 207
            +            +A+V   +P  V+      +   +  I      +    Y  +    
Sbjct: 136 TEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSFAAILSAEYAEQLLKA 195

Query: 208 GNL----EIPLGSGPYKVAKVKAGRSVRYERVKDYWAKDLPINRGFYNFDAMTFDAYRDT 263
           G      + P+G+GP+   + +    +RY   K YW      +      D + F    D 
Sbjct: 196 GKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYW------DPSRVKLDQLIFAINTDA 249

Query: 264 TVALEALKAGAFDYGLEVSAKNWATAYNVPAVREGRLIKEELPNGNPTGMQGFIFNIRRP 323
           +V ++ LKAG      E          +V A++    +K     G   G     +N+R  
Sbjct: 250 SVRVQKLKAG------ECQVTLHPRPADVDALKADPNLKLLTKPGFNLGY--IAYNVRHK 301

Query: 324 VFQDVRVRQALSLLLDYEWTNKQ-LFNGAYTRTGSYFENSEMAARGLPSPNELKILEPLR 382
            F  + VRQAL + +     NKQ + N  Y   G      ++A   +P         P +
Sbjct: 302 PFDQLEVRQALDMAV-----NKQSILNAVYQGAG------QLAVNAMP---------PTQ 341

Query: 383 GKVPEQVFTEVFHNPVSDGSGMIREQQRQAYKLLQEAGWKIVDDKMVDAQGKPASIEFLL 442
               + +  +  +NP             +A +LL+ AG K         +G   ++  + 
Sbjct: 342 WSYDDSI-KDAAYNP------------EKAKELLKAAGVK---------EGTEITLWAMP 379

Query: 443 AQTEF----ERILLPFKRNLADLGIELNIRRVDVSQYITRLRSRDYDMIVGGYPQSNSPG 498
            Q  +    + +    + + A +G+++ I   +  +YI R ++ ++D+ + G+   N  G
Sbjct: 380 VQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEYIKRTKNGEHDVSLIGWTGDN--G 437

Query: 499 NEQREFWSSAAADNPGSRNFIGLRDPAIDQLVDQ 532
           +      +  + D  G  N+    DPA D+L+ Q
Sbjct: 438 DPDNWLGTLYSCDAIGGNNYSMWCDPAYDKLIKQ 471