Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 530 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 72.0 bits (175), Expect = 6e-17
 Identities = 108/462 (23%), Positives = 177/462 (38%), Gaps = 89/462 (19%)

Query: 102 EYGLVAGKI--------EKAPDNSWVRFYLRPEARFH------DGHPMRADDVVFTFNAL 147
           +Y   +GK+        E +PD     F L P+ +FH          + A+DV F+F  +
Sbjct: 60  DYDAASGKLVPSLADSWEVSPDGLTYTFKLHPDVKFHRTEYFTPSRTLTAEDVRFSFERM 119

Query: 148 IKDGAPLYR------------QYYADVAEVVAEEPLKVLFKFKHKNNRELP-LILGQLPV 194
           +    P ++            Q    V ++ A +PL V F   H ++  L  L +G   +
Sbjct: 120 LDPANPWHKIAQSGFPHAQSLQLPTLVKKIDALDPLTVRFTLDHADSTFLAALSMGFASI 179

Query: 195 LPKHWYENREFNRGNLEI----PLGSGPYKVAKVKAGRSVRYERVKDYWAKDLPINRGFY 250
            P   Y  +    G  E     P+G+GP+  ++ +    VRY+   +Y+A   P+     
Sbjct: 180 YPAE-YAEKLLKAGTPEKLNSQPIGTGPFIFSRFQKDAVVRYKANPNYFAGKPPV----- 233

Query: 251 NFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAYNVPAVREGRLIKEELPNGNP 310
             D + F    D  V L+ L        L     +   A   PA++  +           
Sbjct: 234 --DNLIFAITPDANVRLQKLHRDECQIALSPKPLDVGEAEKDPALKVEK---------TA 282

Query: 311 TGMQGFI-FNIRRPVFQDVRVRQALSLLLDYEWTNKQLFNGAYTRTGSYFENSEMAARGL 369
             M  F+  N + P      VRQA++L  D          G+Y +  + FE +  AA G 
Sbjct: 283 AFMTAFLAINSQHPPLDKPEVRQAINLAFD---------KGSYLK--AVFEGTAEAANGP 331

Query: 370 PSPNELKILEPLRGKVPEQVFTEVFHNPVSDGSGMIREQQRQAYKLLQEAGWKIVDDKMV 429
             PN     + L G  P+ +                     +A  LL  AG K  D    
Sbjct: 332 YPPNTWSYAKDLPG-YPQDL--------------------AKAKALLDRAGLK--DGFKT 368

Query: 430 DAQGKPASIEFLLAQTEFERILLPFKRNLADLGIELNIRRVDVSQYITRLRSRDYDMIVG 489
               +P     L         LL  + +LA +GI+  IR ++  + I R ++ ++D++  
Sbjct: 369 TIWTRPTG-SLLNPNPNLGAQLL--QADLAKVGIQAEIRVIEWGELIRRAKAGEHDLLFM 425

Query: 490 GYPQSN-SPGNEQREFWSSAAADNPGSRNFIGLRDPAIDQLV 530
           G+   N  P N     +S AA  +    NF    DPA+D+L+
Sbjct: 426 GWAGDNGDPDNFLTPQFSCAAVKS--GTNFARYCDPALDKLI 465