Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 610 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  984 bits (2545), Expect = 0.0
 Identities = 466/603 (77%), Positives = 534/603 (88%), Gaps = 4/603 (0%)

Query: 10  LAGSLLLACLSLPALAAPQHALTLYDEPPKYPADFKHFDYVNPDAPKGGTFRQSSFGGFD 69
           L G LLL      A AAPQHALTLY+EPPKYPADFKHFDYVNPDAPKGGTFR+S+ GGFD
Sbjct: 8   LLGGLLLCTA---AQAAPQHALTLYNEPPKYPADFKHFDYVNPDAPKGGTFRESAMGGFD 64

Query: 70  SLNPFINKGVAAENIGIIYDTLMRQSQDEPFTEYGLVAGKIEKAPDNSWVRFYLRPEARF 129
           SLNP+I+KGV A+N+G+IYDTL  QS DEP TEYGLVAGKIEKAPDNSWVRFYLRPEARF
Sbjct: 65  SLNPYISKGVPADNLGLIYDTLAMQSLDEPITEYGLVAGKIEKAPDNSWVRFYLRPEARF 124

Query: 130 HDGHPMRADDVVFTFNALIKDGAPLYRQYYADVAEVVAEEPLKVLFKFKHKNNRELPLIL 189
           HDGHP+RA+DVVFTF  LIK+G+P+YR YYADV EVVAE+PLKVLFKFK  NNRELPLIL
Sbjct: 125 HDGHPIRAEDVVFTFQELIKEGSPIYRTYYADVDEVVAEDPLKVLFKFKRTNNRELPLIL 184

Query: 190 GQLPVLPKHWYENREFNRGNLEIPLGSGPYKVAKVKAGRSVRYERVKDYWAKDLPINRGF 249
           GQLPVLPKHW+  R+F +GNLE+PLGSGPYKVA+VKAGR +RYERVKDYWAKDLPI +GF
Sbjct: 185 GQLPVLPKHWWATRDFAKGNLEVPLGSGPYKVAEVKAGRMIRYERVKDYWAKDLPITQGF 244

Query: 250 YNFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAYNVPAVREGRLIKEELPNGN 309
           YNFD    D YRD+TV+LEALKAG FDY LE SAKNWA AYN+PAV +GRLIKEE+PNGN
Sbjct: 245 YNFDNRITDYYRDSTVSLEALKAGQFDYWLEFSAKNWANAYNIPAVAQGRLIKEEIPNGN 304

Query: 310 PTGMQGFIFNIRRPVFQDVRVRQALSLLLDYEWTNKQLFNGAYTRTGSYFENSEMAARGL 369
           PTGMQGF+FN+R+P+FQDVRVR+A+SLLLD+EW+NKQLFNGAYTRT SYFENSEMAA GL
Sbjct: 305 PTGMQGFVFNMRKPMFQDVRVRKAISLLLDFEWSNKQLFNGAYTRTRSYFENSEMAATGL 364

Query: 370 PSPNELKILEPLRGKVPEQVFTEVFHNPVSDGSGMIREQQRQAYKLLQEAGWKIVDDKMV 429
           P P+EL ILEPLRGK+P +VFT+ F    +DGSGMIR QQR+AY+LLQEAGW+IVDDKMV
Sbjct: 365 PGPDELAILEPLRGKIPPEVFTQAFEPSKTDGSGMIRTQQREAYQLLQEAGWRIVDDKMV 424

Query: 430 DAQGKPASIEFLLAQTEFERILLPFKRNLADLGIELNIRRVDVSQYITRLRSRDYDMIVG 489
           D  GKP +IEFLLAQTEFERILLPFKRNLADLGI+L IRRVDVSQ+I R+RSRD+DM+VG
Sbjct: 425 DTSGKPVTIEFLLAQTEFERILLPFKRNLADLGIDLVIRRVDVSQFINRIRSRDFDMLVG 484

Query: 490 GYPQSNSPGNEQREFWSSAAADNPGSRNFIGLRDPAIDQLVDQLINADSRQSLIDHCRAL 549
            +PQS SPGNEQREFW S++AD PGSRN++GL+DPAIDQLV++LI+ADSR+SL+ H +AL
Sbjct: 485 SFPQSTSPGNEQREFWKSSSADKPGSRNYMGLKDPAIDQLVEELIDADSRKSLVAHAKAL 544

Query: 550 DRVLLWGYYVIPNWHIKTWRVAYWNHIGHPNVSPKYDIGIDTWWIKPDVTPAVS-EAPAD 608
           DRVL +GYYVIPNWHIKT+RVAYW+H+GHP V P+YD+G  TWW KPDV PAV+ E  AD
Sbjct: 545 DRVLQFGYYVIPNWHIKTFRVAYWDHLGHPKVPPRYDVGTATWWAKPDVKPAVTLETSAD 604

Query: 609 EAN 611
            A+
Sbjct: 605 PAS 607