Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 619 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  586 bits (1510), Expect = e-171
 Identities = 288/599 (48%), Positives = 406/599 (67%), Gaps = 7/599 (1%)

Query: 11  AGSLLLACLSLPALAAPQHALTLYDEPPKYPADFKHFDYVNPDAPKGGTFRQSSF--GGF 68
           + +L L   S   +AAPQ  LT+Y EP KY A F HFDY NP+APKGG+ R+S+   G F
Sbjct: 10  SSTLALLLASSVVIAAPQPYLTVYGEPAKYAAGFTHFDYANPNAPKGGSLRRSAIEIGRF 69

Query: 69  DSLNPFINKGVAAENI-GIIYDTLMRQSQDEPFTEYGLVAGKIEKAPDNSWVRFYLRPEA 127
           D + P+I+KG+    + G +Y  L ++S DEP+T YGLVA K+E+A D   +RF+L P+A
Sbjct: 70  DHVLPYIDKGIGVSQVDGWLYAPLAQRSLDEPYTVYGLVAEKMERADDGLSLRFFLNPKA 129

Query: 128 RFHDGHPMRADDVVFTFNALIKDGAPLYRQYYADVAEVVAEEPLKVLFKFKHKNNRELPL 187
           RF DG P+ A+DV ++F+ L+  G+  +R  +ADV  V  E   +V F F    NR LPL
Sbjct: 130 RFADGKPITAEDVRYSFDLLMTQGSLRFRTLFADVKHVEVEGERQVRFDFSSNENRTLPL 189

Query: 188 ILGQLPVLPKHWYENREF-NRGNLEIPLGSGPYKVAKVKAGRSVRYERVKDYWAKDLPIN 246
            +  LPV P+HW++ R+F N G  E PLGSGPYKV+K+ +G ++ + R  ++W KDLP++
Sbjct: 190 DIATLPVFPEHWWKTRDFANGGGYEAPLGSGPYKVSKIDSGSTITFTRDPNWWGKDLPVS 249

Query: 247 RGFYNFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAYNVPAVREGRLIKEELP 306
           RG YNFD ++ + + DT VA + L+ GA+D+  E SA  ++  YN PA+ +GRL +  L 
Sbjct: 250 RGLYNFDHLSLEYFGDTEVARQVLRGGAYDFNREFSATGYSIGYNGPALDDGRLQRAHLA 309

Query: 307 NGNPTGMQGFIFNIRRPVFQDVRVRQALSLLLDYEWTNKQLFNGAYTRTGSYFENSEMAA 366
              P   QG++FN+++PVF+D RVRQAL++L D+EW N+Q+    Y R  S+F NS +AA
Sbjct: 310 KEMPQPAQGYVFNVQKPVFKDRRVRQALAMLWDFEWANRQMMRNMYIRQQSFFSNSPLAA 369

Query: 367 RGLPSPNELKILEPLRGKVPEQVFTEVFHNPVSDGSGMIREQQRQAYKLLQEAGWKIVDD 426
              P+  EL ILEPLRG+VP++VFT+VF  PV+DGSGMIR++Q QA  LL+EAGWK   D
Sbjct: 370 TQPPTQEELAILEPLRGQVPDEVFTQVFKAPVTDGSGMIRDKQLQALALLEEAGWKPHGD 429

Query: 427 KMVDAQGKPASIEFLLAQTEFERILLPFKRNLADLGIELNIRRVDVSQYITRLRSRDYDM 486
           K+V+A+G+P    FL AQ+  ER+LLP+KRNLA +GI LNIRR+D SQY+ R+ +RDYDM
Sbjct: 430 KLVNAEGEPLEFTFLNAQSGLERLLLPYKRNLAQIGITLNIRRIDASQYVNRVMARDYDM 489

Query: 487 IVGGYPQSNSPGNEQREFWSSAAADNPGSRNFIGLRDPAIDQLVDQLINADSRQSLIDHC 546
           IV G+P + SPG E   ++ SAAA +PG+ N++ L+DPA+D L+  L+ AD++  ++ + 
Sbjct: 490 IVTGFPVTTSPGMELYNYFGSAAAFDPGANNYMVLKDPAVDSLIKGLVKADTQAQMLTYA 549

Query: 547 RALDRVLLWGYYVIPNWHIKTWRVAYWNHIGHPNVSPKYDIGIDTWW-IKPDVTPAVSE 604
            ALDRVL W Y  IPN++      A+WN  G P +  K D  ++TWW I P  TP  +E
Sbjct: 550 HALDRVLQWNYLWIPNYYPPGTSAAWWNRFGRPAIEAKNDEALETWWEISP--TPLTNE 606