Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 609 a.a., Peptide ABC transporter, periplamic peptide-binding protein from Pseudomonas putida KT2440

 Score =  535 bits (1378), Expect = e-156
 Identities = 281/605 (46%), Positives = 383/605 (63%), Gaps = 19/605 (3%)

Query: 7   LRRLAGSLLLACLSLPALA--APQHALTLYDEPPKYPADFKHFDYVNPDAPKGGTFRQSS 64
           +R L  SL LA LS PA A  +  H    +    KYPA F HFD+VNP APKGGT R  +
Sbjct: 2   IRPLLLSLSLA-LSFPAAAIVSESHGYAQFGTL-KYPATFTHFDWVNPQAPKGGTLRAMA 59

Query: 65  FGGFDSLNPFINKGVAA------ENIGI--IYDTLM------RQSQDEPFTEYGLVAGKI 110
           FG FD+LNP+  KG +       +  GI  + + LM        S DEP + YGL+A  +
Sbjct: 60  FGTFDTLNPYTFKGSSPITTPNFQQYGISELNEPLMVGTGQYDPSGDEPTSSYGLIARSV 119

Query: 111 EKAPDNSWVRFYLRPEARFHDGHPMRADDVVFTFNALIKDGAPLYRQYYADVAEVVAEEP 170
           E + D SWV F LRPEAR+HDG P+ + DV F++  L+KDG P+YR    +V  V    P
Sbjct: 120 EYSEDRSWVVFNLRPEARWHDGQPITSADVAFSYRTLLKDGHPIYRTNLQEVQRVDILGP 179

Query: 171 LKVLFKFKHKNNRELPLILGQLPVLPKHWYENREFNRGNLEIPLGSGPYKVAKVKAGRSV 230
           L++ F FK   N  L L LG++PVLPKH+++ R+F     E PLGSGPY++ +V+ GR +
Sbjct: 180 LRIRFVFKRAGNPLLILRLGEMPVLPKHYWQKRDFKATTFEPPLGSGPYRITQVQPGRRL 239

Query: 231 RYERVKDYWAKDLPINRGFYNFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAY 290
            +ERVK+YW KDL +NRG YNF+ + ++ YRD TVA EA KAG FD  +E  AKNWA  Y
Sbjct: 240 VFERVKNYWGKDLAVNRGKYNFNRVEYEFYRDATVAFEAFKAGEFDIYIEHQAKNWANGY 299

Query: 291 NVPAVREGRLIKEELPNGNPTGMQGFIFNIRRPVFQDVRVRQALSLLLDYEWTNKQLFNG 350
           N PAVR G +IK ++P+  PT  QG   N RR  F D RVRQAL L+LD+EWTN+ LF+ 
Sbjct: 300 NFPAVRRGEVIKAQIPHSIPTQTQGLFMNSRRAAFSDPRVRQALGLMLDFEWTNRALFSS 359

Query: 351 AYTRTGSYFENSEMAARGLPSPNELKILEPLRGKVPEQVFTEVFHNPVSDGSGMIREQQR 410
           AY R+ SY+ NSE AA GLP+  E  +L P R ++P ++F+E +    +DG G+ R+  R
Sbjct: 360 AYRRSTSYYPNSEFAASGLPTGKEWLLLAPFRDQLPAKLFSEPYKVSHTDGRGISRQTLR 419

Query: 411 QAYKLLQEAGWKIVDDKMVDAQGKPASIEFLLAQTEFERILLPFKRNLADLGIELNIRRV 470
           QA  LL EAGWK+   ++VD++G+   +E LL     ERIL P+  NL+ +GI+  +R V
Sbjct: 420 QALGLLAEAGWKLHGQRLVDSKGQQLRMELLLVNPNLERILQPYVENLSSIGIDARLRTV 479

Query: 471 DVSQYITRLRSRDYDMIVGGYPQSNSPGNEQREFWSSAAADNPGSRNFIGLRDPAIDQLV 530
           D +QY  RL   D+DMI+    Q+ SPG EQ  ++ S+ A   GS+N+ G++DP +D L+
Sbjct: 480 DRAQYKQRLDQFDFDMILMTLNQTLSPGLEQWLYFHSSQAATKGSKNYAGVKDPVVDHLL 539

Query: 531 DQLINADSRQSLIDHCRALDRVLLWGYYVIPNWHIKTWRVAYWNHIGHPNVSPKYDIGID 590
           D L+ A +R   +   RALDRVL W YY+IPNW++   R+AY N       +P Y +G++
Sbjct: 540 DTLLAARTRDDQVAAARALDRVLSWHYYMIPNWYLDNHRLAYRNRFAFV-TTPPYTLGLN 598

Query: 591 TWWIK 595
           +WWIK
Sbjct: 599 SWWIK 603