Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 642 a.a., putative ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  577 bits (1488), Expect = e-169
 Identities = 284/599 (47%), Positives = 392/599 (65%), Gaps = 8/599 (1%)

Query: 3   PTHR----LRRLAGSLLLACLSLPALAAPQHALTLYDEPPKYPADFKHFDYVNPDAPKGG 58
           PTH     L ++   L+ +C+     AAP HALT+Y E P+Y A F+HFDYVNP APKGG
Sbjct: 24  PTHSRVNPLPQVLWGLVFSCIGFTVQAAPTHALTVYGEAPRYAASFRHFDYVNPSAPKGG 83

Query: 59  TFRQSSF--GGFDSLNPFINKGVAAENI-GIIYDTLMRQSQDEPFTEYGLVAGKIEKAPD 115
             R+S+   G FD + P+I+KG+    + G++Y  L  +S DEP+T YGL+A ++E+ P+
Sbjct: 84  ILRRSAIEIGQFDHILPYIDKGIGVSEVDGLLYAPLAVRSYDEPYTVYGLIARRMERGPN 143

Query: 116 NSWVRFYLRPEARFHDGHPMRADDVVFTFNALIKDGAPLYRQYYADVAEVVAEEPLKVLF 175
           + W+RF + P A F DG P+RA+DV FTF+ L+  G+  YR  +ADVA V  E    V F
Sbjct: 144 DEWLRFDIDPRATFADGRPVRAEDVRFTFDLLMSKGSLKYRTQFADVARVTVERLHSVRF 203

Query: 176 KFKHKNNRELPLILGQLPVLPKHWYENREFNRG-NLEIPLGSGPYKVAKVKAGRSVRYER 234
             K ++ R L L L  LPV+P+H  + R+F  G   + P+GSGPY++ ++  GRS+ +ER
Sbjct: 204 DLKPEHGRTLALDLASLPVMPEHDLQQRDFANGAGFDKPVGSGPYRIGRIDNGRSITFER 263

Query: 235 VKDYWAKDLPINRGFYNFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAYNVPA 294
              +WA+DLP +RG YNFD +  + + DT VA + LK G +DY  E SA  +   YN   
Sbjct: 264 DPAWWARDLPASRGRYNFDKLRIEYFGDTEVARQVLKGGGYDYNREFSATAYTLGYNGAQ 323

Query: 295 VREGRLIKEELPNGNPTGMQGFIFNIRRPVFQDVRVRQALSLLLDYEWTNKQLFNGAYTR 354
           + +GRL +  L    P   QGF+FN+ +P F+D RVRQAL +L D+EW+N+Q+    Y R
Sbjct: 324 LDDGRLQRAHLGPAKPQVAQGFVFNLDQPQFKDRRVRQALGMLWDFEWSNRQMMRNLYIR 383

Query: 355 TGSYFENSEMAARGLPSPNELKILEPLRGKVPEQVFTEVFHNPVSDGSGMIREQQRQAYK 414
             S F N+ +AAR LP   ELK+L PLRG+VP++VFT VF  PV+DGSG+IR+QQ QA  
Sbjct: 384 QQSVFSNTPLAARQLPDAGELKLLAPLRGQVPDEVFTTVFTAPVTDGSGIIRQQQLQALA 443

Query: 415 LLQEAGWKIVDDKMVDAQGKPASIEFLLAQTEFERILLPFKRNLADLGIELNIRRVDVSQ 474
           LL++AGW    D++V++QG P +  FL  Q   ER+LLP+KRNLA +G+ LNIR VD +Q
Sbjct: 444 LLEQAGWHPEGDRLVNSQGTPLAFTFLNGQAGLERLLLPWKRNLAQIGVTLNIRNVDSAQ 503

Query: 475 YITRLRSRDYDMIVGGYPQSNSPGNEQREFWSSAAADNPGSRNFIGLRDPAIDQLVDQLI 534
           Y+ RL +RDYDMIV GYP + SPG E   ++ SAAA +PGS N + L+DPA+D L+D L+
Sbjct: 504 YVNRLMARDYDMIVTGYPVTLSPGAELYNYFGSAAAHDPGSNNLMVLQDPAVDHLIDGLV 563

Query: 535 NADSRQSLIDHCRALDRVLLWGYYVIPNWHIKTWRVAYWNHIGHPNVSPKYDIGIDTWW 593
            AD++  ++ H  ALDRVL W YY IPN++       +WN  G P V   YD G+DTWW
Sbjct: 564 RADTQADMLRHAHALDRVLQWNYYWIPNYYPPGSSTVWWNRFGLPKVQATYDEGLDTWW 622