Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 603 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  439 bits (1129), Expect = e-127
 Identities = 247/591 (41%), Positives = 333/591 (56%), Gaps = 10/591 (1%)

Query: 8   RRLAGSLLLACLSLP---ALAAPQHALTLYDEPPKYPADFKHFDYVNPDAPKGGTFRQSS 64
           R +  +LL AC  L      A   +A     EP KYP  F H+ Y NP APKGG    S+
Sbjct: 4   RAIIATLLSACAWLADAEPTAQQTYAFATLGEP-KYPQGFTHYGYTNPSAPKGGKATLSA 62

Query: 65  FGGFDSLNPFINKGVAAENIGIIYDTLMRQSQDEPFTEYGLVAGKIEKAPDNSWVRFYLR 124
            G FD+ N F  +G+AA     +YD L   S+DEP + Y L+A     A D SW+   + 
Sbjct: 63  LGTFDNFNRFALRGLAAARTESLYDALYVSSEDEPASYYPLIALTARYASDYSWIDVEMN 122

Query: 125 PEARFHDGHPMRADDVVFTFNALIKDGAPLYRQYYADVAEVVAEEPLKVLFKFKHKNNRE 184
           P ARFHDG P+ A DV FTFN  +  G P +R YY   AEV A  P  V F F   +  +
Sbjct: 123 PAARFHDGSPITAADVAFTFNMFMTQGVPQFRLYYKG-AEVKAMTPHTVRFTFPDPDKEK 181

Query: 185 LPLILGQLPVLPKHWYENREFNRGNLEIPLGSGPYKVAKVKAGRSVRYERVKDYWAKDLP 244
           +  +L  LPV+P+ ++ + + +    + PL SGPY++   + G+ V Y RV DYWA DLP
Sbjct: 182 MLGML-TLPVMPEKFWHDHKLSDPLNKPPLASGPYRITDYRMGQYVIYSRVADYWAADLP 240

Query: 245 INRGFYNFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAYNVPAVREGRLIKEE 304
           +NRG YNFD + +D Y D +VALEA KAGAFD  +E S K+WAT Y       G + K++
Sbjct: 241 VNRGRYNFDQLRYDYYLDDSVALEAFKAGAFDLRIEGSPKHWATQYEGGNFARGYIRKKD 300

Query: 305 LPNGNPTGMQGFIFNIRRPVFQDVRVRQALSLLLDYEWTNKQLFNGAYTRTGSYFENSEM 364
             N      +  +FNI+RP F D RVRQAL+L  D+ W NK LF  +Y R  S+F+N+E 
Sbjct: 301 ETNQAAQDTRWLVFNIQRPQFSDRRVRQALALAFDFNWMNKTLFFNSYQRPSSFFQNTEY 360

Query: 365 AARGLPSPNELKILEPLRGKVPEQVFTEVFHNPVSDGSGMIREQQRQAYKLLQEAGWKIV 424
           AA+G+PS  EL  L PL+ K+P  VF   +    SD SG  R     A +LLQ+AGW++ 
Sbjct: 361 AAQGMPSAEELAWLTPLKDKIPADVFGPAYRPESSDASGYDRTGLLNALQLLQQAGWELK 420

Query: 425 DDKMVDAQ-GKPASIEFLLAQTEFERILLPFKRNLADLGIELNIRRVDVSQYITRLRSRD 483
           +  +V+ Q G+P   E LL        +LPF+ +LA LGI + +R VD  Q+  R R RD
Sbjct: 421 NQVLVNKQTGQPFRFELLLPSAANSIYVLPFQHSLARLGIRMEVRSVDSPQFNNRFRKRD 480

Query: 484 YDMIVGGYPQSNSPGNEQREFWSSAAADNPGSRNFIGLRDPAIDQLVDQLI-NADSRQSL 542
           +DMI   YP    P ++    WSS   ++  S N  G++D AIDQL+D +I +   + +L
Sbjct: 481 FDMIPKLYPAMPYPSSDLAISWSSGYINS--SYNSPGVQDAAIDQLIDNIIRHQGDKPAL 538

Query: 543 IDHCRALDRVLLWGYYVIPNWHIKTWRVAYWNHIGHPNVSPKYDIGIDTWW 593
           +    ALDRVL W  + IP W     R AYWN    P   P Y +GID+WW
Sbjct: 539 LSLGPALDRVLTWNQFAIPMWFSNHDRFAYWNKFAMPATRPAYTLGIDSWW 589