Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 542 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score = 73.2 bits (178), Expect = 3e-17
 Identities = 115/515 (22%), Positives = 198/515 (38%), Gaps = 75/515 (14%)

Query: 67  GFDSLNPFINKGVAAENIGI-----IYDTLMRQSQDEPFTEYGLVAGKIEKAPDNSWVRF 121
           G  S  P I+  + A ++       + D+L+ Q++D  FT +  +A + E + +N+   F
Sbjct: 49  GLGSDTPVIDPSITAYSVAALVARNVVDSLVGQAEDNRFTPW--LAERWEISDNNTRYTF 106

Query: 122 YLRPEARFHDGHPMRADDVVFTFNALI--KDGAPLYRQYYADVAEVVAEEPLKVLFKFKH 179
           +LR +  F DG  + A  V +  + ++  K  +   +     +  +   +   V+  +K 
Sbjct: 107 HLRKDVTFSDGTKLDAAAVKYNLDRILDPKTTSSYAKSLLGPIDSISTPDDDTVVISYKS 166

Query: 180 K-----NNRELPLILGQLPVLPKHWYENREFNRGNLEIPLGSGPYKVAKVKAGRSVRYER 234
                     LP +  Q P      Y     N  N  +  GSGP+ +     G   R ++
Sbjct: 167 PFAALLQGLSLPYLGIQSPT-----YLKNTPNTSNTIV--GSGPFILESFVKGSGSRLKK 219

Query: 235 VKDY-WAKDLPINRGFYNFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAYNVP 293
             DY W      + G    D + F    +++V L AL +G      +V A +     N  
Sbjct: 220 RPDYHWGPGYAAHTGPAYLDKIEFKYLPESSVRLGALSSG------QVQAIDAVPPANAA 273

Query: 294 AVREGRLIKEELPNGNPTGMQGFIFNIRRPVFQDVRVRQALSLLLDYEWTNKQLFNGAYT 353
           A+++   + E +   NP   +    N  +  FQDV VR+A    +D     K  F G   
Sbjct: 274 ALKKDARL-ELITRENPGVNRVLYLNTSKGPFQDVNVRRAFLHAVDAASATKVAFFGTLK 332

Query: 354 RTGSYFENSEMAARGLPSPNELKILEPLRGKVPEQVFTEVFHNPVSDGSGMIREQQRQAY 413
                      AA  +  P+ L                  +  P +   G      ++A 
Sbjct: 333 -----------AADNILGPSTL-----------------YYDKPAASLGGF---DLKKAI 361

Query: 414 KLLQEAGWKIVDDKMVDAQ-GKPASIEFLLAQTEFER----ILLPFKRNLADLGIELNIR 468
           +LL +AGWK  D +    + GK  ++ F+ + +  E     +    +  +   GI++ + 
Sbjct: 362 QLLDDAGWKTKDGEGYRTKDGKRLTVNFVYSTSSSEAAEITLFQAVQYQVKQAGIDVQLN 421

Query: 469 RVDVSQYITRLRSRDYDMIVGGYPQSNSPGNEQREFWSSAAADNPGSRNFIGLRDPAIDQ 528
            VD   +I+R    DYD I   Y     P   +  F S+     P   NF   R  ++D 
Sbjct: 422 PVDGGGFISRTNDNDYD-IASNYFVRAEPDILRTVFDSNYIP--PNGNNF--SRTHSLDD 476

Query: 529 LVDQLINA--DSRQSLIDHCRALDRVLLWGYYVIP 561
            + + I A    RQ L     A+   LL   Y +P
Sbjct: 477 KLRKAIGAGDGERQQLYS---AIQHELLDQAYAVP 508