Pairwise Alignments

Query, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 565 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 80/310 (25%), Positives = 128/310 (41%), Gaps = 38/310 (12%)

Query: 70  SLNPFINKGVAAENIGIIYDTLMRQSQDEPFTEYG----LVAGKIEKAPDNSWVRFYLRP 125
           +LNP I   VA+  +  I   ++    +  F   G     +A + + + D     F LR 
Sbjct: 78  NLNPAI---VASNGVFYIASKIVEPLAEASFNGKGGLEPRLATEWQGSDDGLSATFKLRE 134

Query: 126 EARFHDGHPMRADDVVFTFNALIKDGAPLYRQYYADVAEVVAEEPLKVLFKFKHKNNREL 185
              +HDG P  + DV F+  ++ K    L R  +A++ +V        +F F        
Sbjct: 135 GVTWHDGKPFTSADVAFSALSVWKPLQNLGRLVFANLEKVETPNDHTAVFHFSKPT--PF 192

Query: 186 PLILGQLPVL----PKHWYENREF--NRGNLEIPLGSGPYKVAKVKAGRSVRYERVKDYW 239
            LI   LPV+    PKH YE  +   N  N + P+G+GP+  A+ K G   R  R  +YW
Sbjct: 193 QLIRNALPVVTSVVPKHLYEGTDIATNPANTK-PVGTGPFVFAEYKPGEYYRLTRNPNYW 251

Query: 240 AKDLPINRGFYNFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAYNVPAVREGR 299
           AK+ P        D + +    D   A  AL+A              A    VP     R
Sbjct: 252 AKNQP------QLDEIIYRVLPDRAGAASALEAEEIQL---------AAFSAVPLADLAR 296

Query: 300 LIKEELPNGNPTGMQGFIF------NIRRPVFQDVRVRQALSLLLDYEWTNKQLFNG-AY 352
           + K+        G +   +      N RR    D++VR+A++  +D ++   ++F G A 
Sbjct: 297 IAKQPGIKVIADGYEALTYQLVVEINHRRKELADLKVRKAIAHAIDKKFVIDKVFLGYAT 356

Query: 353 TRTGSYFENS 362
             TG   +N+
Sbjct: 357 ASTGPVPKNA 366