Pairwise Alignments

Query, 609 a.a., Peptide ABC transporter, periplamic peptide-binding protein from Pseudomonas putida KT2440

Subject, 610 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  538 bits (1387), Expect = e-157
 Identities = 270/575 (46%), Positives = 370/575 (64%), Gaps = 15/575 (2%)

Query: 34  KYPATFTHFDWVNPQAPKGGTLRAMAFGTFDTLNPYTFKGSSPITTPNFQQYGISELNEP 93
           KYPA F HFD+VNP APKGGT R  A G FD+LNPY  KG             +   N  
Sbjct: 34  KYPADFKHFDYVNPDAPKGGTFRESAMGGFDSLNPYISKG-------------VPADNLG 80

Query: 94  LMVGTGQYDPSGDEPTSSYGLIARSVEYSEDRSWVVFNLRPEARWHDGQPITSADVAFSY 153
           L+  T     S DEP + YGL+A  +E + D SWV F LRPEAR+HDG PI + DV F++
Sbjct: 81  LIYDTLAMQ-SLDEPITEYGLVAGKIEKAPDNSWVRFYLRPEARFHDGHPIRAEDVVFTF 139

Query: 154 RTLLKDGHPIYRTNLQEVQRVDILGPLRIRFVFKRAGNPLLILRLGEMPVLPKHYWQKRD 213
           + L+K+G PIYRT   +V  V    PL++ F FKR  N  L L LG++PVLPKH+W  RD
Sbjct: 140 QELIKEGSPIYRTYYADVDEVVAEDPLKVLFKFKRTNNRELPLILGQLPVLPKHWWATRD 199

Query: 214 FKATTFEPPLGSGPYRITQVQPGRRLVFERVKNYWGKDLAVNRGKYNFNRVEYEFYRDAT 273
           F     E PLGSGPY++ +V+ GR + +ERVK+YW KDL + +G YNF+    ++YRD+T
Sbjct: 200 FAKGNLEVPLGSGPYKVAEVKAGRMIRYERVKDYWAKDLPITQGFYNFDNRITDYYRDST 259

Query: 274 VAFEAFKAGEFDIYIEHQAKNWANGYNFPAVRRGEVIKAQIPHSIPTQTQGLFMNSRRAA 333
           V+ EA KAG+FD ++E  AKNWAN YN PAV +G +IK +IP+  PT  QG   N R+  
Sbjct: 260 VSLEALKAGQFDYWLEFSAKNWANAYNIPAVAQGRLIKEEIPNGNPTGMQGFVFNMRKPM 319

Query: 334 FSDPRVRQALGLMLDFEWTNRALFSSAYRRSTSYYPNSEFAASGLPTGKEWLLLAPFRDQ 393
           F D RVR+A+ L+LDFEW+N+ LF+ AY R+ SY+ NSE AA+GLP   E  +L P R +
Sbjct: 320 FQDVRVRKAISLLLDFEWSNKQLFNGAYTRTRSYFENSEMAATGLPGPDELAILEPLRGK 379

Query: 394 LPAKLFSEPYKVSHTDGRGISRQTLRQALGLLAEAGWKLHGQRLVDSKGQQLRMELLLVN 453
           +P ++F++ ++ S TDG G+ R   R+A  LL EAGW++   ++VD+ G+ + +E LL  
Sbjct: 380 IPPEVFTQAFEPSKTDGSGMIRTQQREAYQLLQEAGWRIVDDKMVDTSGKPVTIEFLLAQ 439

Query: 454 PNLERILQPYVENLSSIGIDARLRTVDRAQYKQRLDQFDFDMILMTLNQTLSPGLEQWLY 513
              ERIL P+  NL+ +GID  +R VD +Q+  R+   DFDM++ +  Q+ SPG EQ  +
Sbjct: 440 TEFERILLPFKRNLADLGIDLVIRRVDVSQFINRIRSRDFDMLVGSFPQSTSPGNEQREF 499

Query: 514 FHSSQAATKGSKNYAGVKDPVVDHLLDTLLAARTRDDQVAAARALDRVLSWHYYMIPNWY 573
           + SS A   GS+NY G+KDP +D L++ L+ A +R   VA A+ALDRVL + YY+IPNW+
Sbjct: 500 WKSSSADKPGSRNYMGLKDPAIDQLVEELIDADSRKSLVAHAKALDRVLQFGYYVIPNWH 559

Query: 574 LDNHRLAYRNRFAFVTTPP-YTLGLNSWWIKTSEK 607
           +   R+AY +       PP Y +G  +WW K   K
Sbjct: 560 IKTFRVAYWDHLGHPKVPPRYDVGTATWWAKPDVK 594