Pairwise Alignments

Query, 609 a.a., Peptide ABC transporter, periplamic peptide-binding protein from Pseudomonas putida KT2440

Subject, 521 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 78.2 bits (191), Expect = 8e-19
 Identities = 107/481 (22%), Positives = 183/481 (38%), Gaps = 74/481 (15%)

Query: 115 IARSVEYSEDRSWVVFNLRPEARWHDGQPITSADVAFSYRTLLKDGHPI--YRTNLQEVQ 172
           +A S +  +D++W  F LR + +W DG P ++ D+ FS++        +  Y   L+ V+
Sbjct: 69  LASSWKALDDKTWE-FKLRTDIKWQDGTPFSADDIVFSFQRSRNVPGSVASYSGALRTVE 127

Query: 173 RVDILGPLRIRFVFKRAGNPLLILRLGEMPVLPKHYWQK---RDFKATTFEPPLGSGPYR 229
            V    P  +  V     NP+L L +  + ++ KH  +K    D+ A      +G+GPY+
Sbjct: 128 SVTAKDPATL-IVKTNTPNPMLPLEIASIYIVSKHVGEKSKTEDYNAG--RAVVGTGPYK 184

Query: 230 ITQVQPGRRLVFERVKNYWGKDLAVNRGKYNFNRVEYEFYRDATVAFEAFKAGEFDIY-- 287
                PG R VFER   Y+G        K  + +V Y F  +      A  AG+ D+   
Sbjct: 185 FVSYVPGDRTVFERNPGYYGP-------KPLWEKVNYRFINNGAARTAALLAGDVDVIDK 237

Query: 288 -----IEHQAKN-WANGYNFPAVR---RGEVIKAQIPHSIPTQTQGLFMNSRRAAFSDPR 338
                +E   K+   + Y +P +R        KA  P+   T   G  +   +    D R
Sbjct: 238 VAVTDVEKLRKDPKVSVYTYPGLRVLLLQPTFKAG-PNEFITDNAGKPL--EKNPLLDVR 294

Query: 339 VRQALGLMLDFEWTNRALFSSAYRRSTSYYPNSEFAASGLPTGKEWLLLAPFRDQLPAKL 398
           VRQAL L ++ +     +       +  + P   F                         
Sbjct: 295 VRQALSLAINRKAIVDRVLQGTVTEANQWMPKGSFG------------------------ 330

Query: 399 FSEPYKVSHTDGRGISRQTLRQALGLLAEAGWKLHGQRLVDSKGQQLRMELLLVNPNLER 458
                   + D + I+     QA  LLAEAG+    Q  +   G +         P    
Sbjct: 331 -------YNPDVKDIA-YNAEQAKKLLAEAGFPQGFQIAIHVPGDRY--------PQAPE 374

Query: 459 ILQPYVENLSSIGIDARLRTVDRAQYKQRLDQFDFDMILMTLNQTLSP---GLEQWLYFH 515
            +Q   +  S IG+  ++  V  A Y  R ++ ++ + ++           GL Q L   
Sbjct: 375 TVQAVAQFWSRIGVKTKVEVVPWAVYSGRANKNEYAVSVIAWGNGTGEAGYGLLQTLTTP 434

Query: 516 SSQAATKGSKNYAGVKDPVVDHLLDTLLAARTRDDQVAAARALDRVLSWHYYMIPNWYLD 575
            ++   +GS N+    +  VD  LD          + A  R   ++++     IP ++  
Sbjct: 435 DAKRG-RGSNNWGRYSNESVDKALDAATVEFDAKRREAIFRHAAKLVTDDVGQIPLYHYQ 493

Query: 576 N 576
           N
Sbjct: 494 N 494